Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 95.9 bits (237), Expect = 3e-24
 Identities = 103/465 (22%), Positives = 189/465 (40%), Gaps = 52/465 (11%)

Query: 68  ESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALGK 127
           +S++   +  +  P LA SW   DD   W F++R ++++ DG+  +A     +   +   
Sbjct: 54  DSIINSRDGGKLEPALASSWKALDDK-TWEFKLRTDIKWQDGTPFSADDIVFSFQRSRNV 112

Query: 128 PGVIKQVP-----IKAITAQNDQVVIELNTVYRPLAAVLAHYSLAIASP--------SSY 174
           PG +         ++++TA++   +I       P+   L   S+ I S           Y
Sbjct: 113 PGSVASYSGALRTVESVTAKDPATLIVKTNTPNPMLP-LEIASIYIVSKHVGEKSKTEDY 171

Query: 175 DASGNVIRLLGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETINYLAGHRSESRALLAQ 234
           +A   V+   GTGPY+        +    R   Y+G     E +NY   +   +R     
Sbjct: 172 NAGRAVV---GTGPYKFVSYVPGDRTVFERNPGYYGPKPLWEKVNYRFINNGAARTAALL 228

Query: 235 TGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLI-----------------KLNNEH 277
            G  D++  +    +  L++   + +Y     R +L+                 K   ++
Sbjct: 229 AGDVDVIDKVAVTDVEKLRKDPKVSVYTYPGLRVLLLQPTFKAGPNEFITDNAGKPLEKN 288

Query: 278 PLLNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQ 337
           PLL+   VRQA+SLAINR+ I   VL+   +EA+Q + P     +  D      +   A+
Sbjct: 289 PLLD-VRVRQALSLAINRKAIVDRVLQGTVTEANQ-WMPKGSFGYNPDVKDIAYNAEQAK 346

Query: 338 TLLANQGWTLNDQGLLEREGQAFRVQLLTYADR-PELPLIATALQAQLKEIGIQVDIAID 396
            LLA  G+            Q F++ +    DR P+ P    A+      IG++  + + 
Sbjct: 347 KLLAEAGFP-----------QGFQIAIHVPGDRYPQAPETVQAVAQFWSRIGVKTKVEVV 395

Query: 397 NSSAIPAKHHDGTLEMALIARNFGTIADPLPLLLSDFATHQGSDWGPTNW---SSPQFSQ 453
             +    + +     +++IA   GT      LL +          G  NW   S+    +
Sbjct: 396 PWAVYSGRANKNEYAVSVIAWGNGTGEAGYGLLQTLTTPDAKRGRGSNNWGRYSNESVDK 455

Query: 454 LLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNK 498
            L   + E D  R + +   A++L+ D++  IP+ +Y+ I +  K
Sbjct: 456 ALDAATVEFDAKRREAIFRHAAKLVTDDVGQIPLYHYQNIWAAKK 500