Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  104 bits (260), Expect = 7e-27
 Identities = 124/504 (24%), Positives = 205/504 (40%), Gaps = 51/504 (10%)

Query: 44  SGPFEFNSQDLAKDGFLFSRL--QVVESLVGIN-ENSQPYPLLAKSWTVSDDGLVWRFQI 100
           S P  FN Q LA +      L  Q+  +L+ I+ E   P   LA SWTV+  GL + F++
Sbjct: 40  SAPTTFNPQ-LADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWTVNSTGLEYVFKL 98

Query: 101 RPEVQFHDGS------QLTAQAAATALNHALG------KPGVIKQVPIKAITAQN----- 143
           RP+V F           L A     +    +       K G  +    K I  QN     
Sbjct: 99  RPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFKGIDFQNLLVDV 158

Query: 144 ---DQVVIELNTVYRPLAAVLAHYSLAIASPSSYDASGNVI----------RLLGTGPYQ 190
              D + ++   + RP  + L++ + + A   S + +  +I            LGTGP+ 
Sbjct: 159 SALDDLTVKF-VLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLDNLPLGTGPFY 217

Query: 191 IAQLQAPHKASVIRFNAYWGKPASIETINYLAGHRSESRALLAQTGQADLVYTLDPISIP 250
           +A+        + R   YW   A +E + +    R           + D++       +P
Sbjct: 218 LAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECDVLNAPISSQLP 277

Query: 251 SLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQAISLAINREGIAQSVLKLPGSEA 310
           +++++ ++ L          I +N +HP LN   VR+A++ AINR+ I  SV    GS A
Sbjct: 278 AIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILDSVYYGTGSIA 337

Query: 311 HQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTLNDQGLLEREGQAFRVQLLTYADR 370
             +  P   A+   D  Q +     AQ LL   G+    +           V +   A  
Sbjct: 338 FTILPPTSWAYQ-QDTAQIRYDRNYAQALLREAGFATGLE-------LTMSVPVEPKAYN 389

Query: 371 PELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEMALIARNFGTIADP---LP 427
           P     A  +QA L +IG+ + +  ++ S          +++ L     G   DP   L 
Sbjct: 390 PSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWT-GDTGDPDNFLR 448

Query: 428 LLLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARYQ-QLAAQASQLLADEMPLIP 486
            LLS  +   G +   + W    F  LL +L+ E++  RY+  L  QA  +L  E P+IP
Sbjct: 449 PLLSCDSNRAGLN--VSMWCDSDFDFLL-DLALEANKPRYRLNLYHQAQNILNQEFPVIP 505

Query: 487 VTYYRQIVSVNKRVAGFSFDPFEI 510
           + +  Q  + +K + G    PF +
Sbjct: 506 LAHGIQFTAYSKSLTGIRISPFNV 529