Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

 Score = 94.4 bits (233), Expect = 1e-23
 Identities = 115/477 (24%), Positives = 197/477 (41%), Gaps = 58/477 (12%)

Query: 70  LVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALGKPG 129
           L+G++   +P   LA+SW VS D  V+  ++RP +   DGS + A+  A  L   L  P 
Sbjct: 92  LIGLDSQGKPVARLAESWQVSPDNRVYTIKLRPNLVNSDGSPIKAEDIAFTLT-LLHDPA 150

Query: 130 VIKQVPIKAITAQN------------------DQVVIELNTVYRPLAAVLAHYSLAIASP 171
              +  I     Q                   D   +++ T  +P A  L      + S 
Sbjct: 151 YDGETDITPAHIQGGAEYKNGTAPSISGLKVIDDRTLQITTT-QPGATTLQLIGGPVLSK 209

Query: 172 SSYDASGNVIRL----------LGTGPYQIAQLQAPHKASVIRFNA----YWGKPASIET 217
           + Y       +L          LG GPY I     P +   IRF+A    Y GKPA    
Sbjct: 210 AYYGKEYQRGKLDSVRELNGKPLGNGPY-IYDKYVPGQE--IRFHANPNFYLGKPAVARF 266

Query: 218 INYLAGHRSESRALLAQTGQADL-VYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNE 276
           I  +    +  +  L QTG+ D   +T  P  I  L+     ++ + S      +  N +
Sbjct: 267 IYRVTNPSTNFQ--LFQTGETDYDAFTSKPDDIEQLKLLSFANINLYSSSDYSRVDFNFK 324

Query: 277 HPLLNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATA 336
            P L  A VRQA+   ++R+ +   V +  GS A+Q  SP   A+           +  A
Sbjct: 325 RPALQDARVRQALIYGLDRQKLITVVYQGYGSVANQPISPVSWAYDPKGINPYAYDVNKA 384

Query: 337 QTLLANQGWTLNDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAID 396
           + LL   GW     G+ +++G+   + LL         L+  A +   ++IG+ +   + 
Sbjct: 385 KQLLDQAGWKPGADGIRQKDGKKLELTLLVTKKLINDALVPIA-KDNYRQIGVLLKPQVL 443

Query: 397 NSSAIPAKHHDGTLEMALIARNFGTIADPLPLLLSDFATHQG-----SDWGPTNWSSPQF 451
           + +A+ A+   G  ++A ++ +   + DP          H G     S    T +S+PQ 
Sbjct: 444 DFNALLAQRKAGNYDLASLSTS--GLNDP----------HDGVRDFISQVSETGYSNPQV 491

Query: 452 SQLLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDPF 508
            +L+ E +   D  + + L     Q+LA++ P+I +   + + + + RV GF  D +
Sbjct: 492 DKLIGEANATLDIEQRKPLYHHLYQVLAEDPPVILLGNRKVLSASSARVTGFKPDVY 548