Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., Dipeptide transport system, periplasmic component in protein degradation cluster from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  105 bits (261), Expect = 5e-27
 Identities = 108/458 (23%), Positives = 189/458 (41%), Gaps = 35/458 (7%)

Query: 68  ESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALGK 127
           + L G++++ +   +LA+ +TVSDDGL +   +R  V+F DG+   A A    L+ A   
Sbjct: 60  QGLFGLDKDMKVKNVLAEGYTVSDDGLTYTITLRQGVKFQDGADFNAAAVKANLDRASNP 119

Query: 128 PGVIKQVPIKAITAQND-----QVVIELNTVYRPLAAVLAHYSLAIASPSSYDASGNVIR 182
              +K+  +    A+ +      V I L   +     +LAH + A+ SP + +  G  I 
Sbjct: 120 DNHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAHPATAMISPQALEKYGKDIG 179

Query: 183 L--LGTGPYQIAQLQAPHKASVIRFNAYW--GKPASIETINYLAGHRSESRALLAQTGQA 238
              +GTGPYQ+          V +F  YW  G P  +++I +     + +RA + QTG+A
Sbjct: 180 FHPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLP-KLDSITWRPVTDNNTRAAMLQTGEA 238

Query: 239 DLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQAISLAINREGI 298
              + +       L ++ NL+L          I +N      ++  VR+A++ AINR+ +
Sbjct: 239 QFAFPIPYEQAALLAKNKNLELVASPSIMQRYISMNVTQKPFDNPKVREALNYAINRQAL 298

Query: 299 AQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRH-LATAQTLLANQGWTLNDQGLLEREG 357
            +       + A  +  P++     A   QP  +  A A+ LL   G+            
Sbjct: 299 VKVAFAGYATPATGVVPPSIA---YAQSYQPWPYDPAKARELLKEAGYP----------- 344

Query: 358 QAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDI-AIDNSSAIPAKHHDGTLE--MAL 414
             F   L +  +      +    Q QL +IG++  I A+D           G  E  + +
Sbjct: 345 DGFSTTLWSSHNHSTAQKVLQFTQQQLAQIGVKARITAMDAGQRAAEVEGKGQKESGVRM 404

Query: 415 IARNFGTIADPLPLLLSDFATHQGSDWGPTN-----WSSPQFSQLLAELSTESDNARYQQ 469
               +          LS     Q  +W PT      +S+ Q    LA     +D     +
Sbjct: 405 FYTGWSASTGEADWALSPLFASQ--NWPPTQFNTAFYSNKQVDSDLAAALKTNDPQEKTR 462

Query: 470 LAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
           L  +A  ++  E P IP+   + + + +K + GF   P
Sbjct: 463 LYKEAQDIIWKESPWIPLVVEKLVSAHSKNLTGFWIMP 500