Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 103/469 (21%), Positives = 187/469 (39%), Gaps = 63/469 (13%)

Query: 81  PLLAKSWTVSDDGLVWRFQIRPEVQFHDGS------QLTAQAAATALNH----------- 123
           P LA+ W +S+DG  + F +R  V++          +L A     + +            
Sbjct: 67  PGLAEKWDISEDGKTYTFHLRKGVKWQSSKDFKPTRELNADDVVFSFDRQKNEQNPYHKV 126

Query: 124 ---------ALGKPGVIKQVPIKAITAQNDQVVIELNTVYRPLAAVLAHYSLAIASPSSY 174
                     +G P +I +V  K +     Q V+      RP A  LA  ++  AS  S 
Sbjct: 127 SGGSYEYFEGMGLPDLISEV--KKVDDHTVQFVLT-----RPEAPFLADLAMDFASILSK 179

Query: 175 DASGNVIRL----------LGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETINYLAGH 224
           + + N+++           +GTGP+Q+ Q Q   +     F+ YWG    I+ + +    
Sbjct: 180 EYADNMLKAGTPEKVDLNPVGTGPFQLVQYQKDSRILYKAFDGYWGTKPQIDRLVFSITP 239

Query: 225 RSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHAD 284
            +  R    Q  +  ++   +P  I  +++  N++L  ++      +  N +   L+   
Sbjct: 240 DASVRYAKLQKNECQVMPYPNPADIARMKEDKNINLMEQAGLNVGYLSYNVQKKPLDDVK 299

Query: 285 VRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKT---QPQRHLATAQTLLA 341
           VRQA++ A+N+E I ++V +  G  A  L  P +  ++   K     P++  A  +    
Sbjct: 300 VRQALTYAVNKEAIIKAVYQGAGVAAKNLIPPTMWGYNDDIKDYGYDPEKAKALLKEAGL 359

Query: 342 NQGWTLNDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAI 401
            +G+T+        +  A  VQ       P    +A  +QA   +IG+Q  I        
Sbjct: 360 EKGFTI--------DLWAMPVQ---RPYNPNARRMAEMIQADWAKIGVQAKIVTYEWGEY 408

Query: 402 PAKHHDGTLEMALIARNFGTIADP---LPLLLSDFATHQGSDWGPTNWSSPQFSQLLAEL 458
             +  DG  +  ++    G   DP      L S  A  QGS++  + W    F  L+   
Sbjct: 409 LKRAKDGEHQTVMMGWT-GDNGDPDNFFATLFSCDAAQQGSNY--SKWCYKPFEDLIQPA 465

Query: 459 STESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
               D+ +  +L  QA  ++ D+ P + + +      V K V G+  DP
Sbjct: 466 RATDDHNKRIELYKQAQVVMHDQAPALIIAHSTVYEPVRKEVKGYVVDP 514