Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 98/439 (22%), Positives = 180/439 (41%), Gaps = 39/439 (8%)

Query: 83  LAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALG---------------K 127
           LA+S T S D L +   ++P +++ DG  LTA       N  L                K
Sbjct: 90  LAESLTPSADNLSYTLTLKPNLKWQDGQPLTADDVVFTFNKLLDAKQHSFFRSMFTYGDK 149

Query: 128 PGVIKQVPIKAITAQNDQVVIELNTVYRPLAAVLAHYSLAIASPSSYDASGNVIRLLGTG 187
           P  + +V  + +     QV          +  +  H     A     + S      +G+G
Sbjct: 150 PVQVSKVDDRTVKFTLPQVSAAFTGTLVQIYPIPQH---VFAGEGDLEKSSKNDAPVGSG 206

Query: 188 PYQIAQLQAPHKASVIRFNAYWGKPASIETINYLAGHRSESRALLAQTGQADLVYTLDPI 247
           P++  + +A    ++ RF+ YW   A ++++ Y     S +  L  Q G+ +L   +DP 
Sbjct: 207 PFKFKEYRAGQYYALTRFDDYWNGKAKLDSVTYRFAKDSNAANLALQNGEINLKM-VDPQ 265

Query: 248 SIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQAISLAINREGIAQSVL-KLP 306
            +  L+ +   D  +    R   +  N   P++    +RQAI+ AIN++ + Q+    L 
Sbjct: 266 DVNRLKNTGKFDFVVYPEGRLAYMTFNQNVPVMKSKALRQAIAYAINKDELTQTAFTSLD 325

Query: 307 GSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTLNDQGLLEREGQAFRVQLLT 366
            ++    F      +   D  Q +  L  A+ LL   G   N            +++L  
Sbjct: 326 YAKPATSFLTPDTLYKTDDVEQYKFDLQKAKDLLKTSGAPDN-----------LKLRLAY 374

Query: 367 YADRPELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHD---GTLEMALIARNFGTIA 423
                    +A  +Q  LK IG+ V++   +S+A+  +  D      E+ L     G+  
Sbjct: 375 VNTNKTQESMALYIQQALKGIGVNVELMPLDSNAMSQRSLDMNNTAWELNLGGYIMGSEP 434

Query: 424 DPLPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARYQQLAAQASQLLADEMP 483
           D    L   F +++  ++   ++ +PQF  L  + + E+D A+   +  Q  Q +A++M 
Sbjct: 435 DGYKSL---FMSNEAYNYA--HYKNPQFDALWDKGAVETDAAKRADIYKQIQQTVANDMT 489

Query: 484 LIPVTYYRQIVSVNKRVAG 502
             P+ Y    V+V+KR  G
Sbjct: 490 YYPIAYTNATVAVDKRFGG 508