Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  110 bits (276), Expect = 9e-29
 Identities = 109/456 (23%), Positives = 190/456 (41%), Gaps = 31/456 (6%)

Query: 68  ESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHALGK 127
           + L G+++  +   +LA+ +TVS+DGLV+  ++R  V+F DG+   A+A    L+ A   
Sbjct: 60  QGLFGLDKEMKLKNVLAEGYTVSEDGLVYTIKLRTGVKFQDGTDFNAEAVKVNLDRASNP 119

Query: 128 PGVIKQVPIKAITAQND-----QVVIELNTVYRPLAAVLAHYSLAIASPSSYDASGNVIR 182
              +K+  +    A  +      V I L   +     +LAH + A+ SP++    G  I 
Sbjct: 120 ENSLKRYNLYKNIASTEVVDPATVKITLKEPFSAFINILAHPATAMISPAALKKYGKEIG 179

Query: 183 L--LGTGPYQIAQLQAPHKASVIRFNAYW--GKPASIETINYLAGHRSESRALLAQTGQA 238
              +GTGPY++          V +F  YW  G P  ++TI +     + +RA + QTG+A
Sbjct: 180 FHPVGTGPYELLTWNQTDFVKVKKFAGYWQQGLP-KLDTITWRPVVDNNTRAAMLQTGEA 238

Query: 239 DLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQAISLAINREGI 298
              + +       LQ++  L+L          I +N      ++  VR+AI+ AINR+ +
Sbjct: 239 QFAFPIPYEQAAILQKNSKLELVASPSIMQRYISMNVTQKPFDNPKVREAINYAINRQAL 298

Query: 299 AQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRH-LATAQTLLANQGWTLNDQGLLEREG 357
            +       + A  +  PA+     A   QP  +  A A+ LL   G+            
Sbjct: 299 VKVAFAGYATPATGVLPPAIA---YAQSYQPWPYDPAKARELLKEAGFP----------- 344

Query: 358 QAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDI-AIDNSSAIPAKHHDGTLEMALIA 416
             F   L +  +      +    Q QL ++GI+V + A+D           G  E  +  
Sbjct: 345 NGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKVQVTAMDAGQRAAEVEGKGQKESGVRM 404

Query: 417 RNFGTIADPLPLLLSDFATHQGSDWGPT-----NWSSPQFSQLLAELSTESDNARYQQLA 471
              G  A       +        +W PT      +S+PQ  + LA+    +      +L 
Sbjct: 405 FYTGWTASTGEADWALSPLFASQNWPPTLFNTAFYSNPQVDKDLADALKTTKPEEKVRLY 464

Query: 472 AQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
             A  ++  E P +P+   + + + NK + GF   P
Sbjct: 465 KDAQDIIWKESPWVPLVVEKLVSAHNKALTGFYIMP 500