Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  107 bits (266), Expect = 1e-27
 Identities = 126/533 (23%), Positives = 218/533 (40%), Gaps = 51/533 (9%)

Query: 13  MKKRLFGLILALGGAGIWLTKTEPAPSSLEIS--GPFEFNSQDLAKDGFL-FSRLQVVES 69
           MK +L  L LAL  A + ++ T  A + +  S   P  FN Q       +  S + V   
Sbjct: 1   MKSKLTTLALAL--AALTVSSTVAAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPVYNR 58

Query: 70  LVGINENS-QPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATA-------- 120
           LV     + +  P LA+ W VSDDG V+ F +R  V+F      T      A        
Sbjct: 59  LVDFKPGTTELVPSLAERWEVSDDGKVYTFHLRKGVKFQSNKSFTPTRDFNADDVIFSFM 118

Query: 121 ----LNHAL-----GKPGVIKQVPIKAITAQNDQV---VIELNTVY--RPLAAVLAHYSL 166
               +NH       G     + +   ++    D+V    +     +   P  A LA Y  
Sbjct: 119 RQKDVNHPYHNVSNGSYSNFESLEFGSLITGIDKVDDHTVRFTLAHPEAPFVADLAWYFA 178

Query: 167 AIASPSSYDA---SGNVIRL----LGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETIN 219
           +I S    DA   +G   ++    +GTGP+++AQ Q   +     F  YW   + ++ + 
Sbjct: 179 SILSAEYADAMLKAGTPEKVDMEPIGTGPFKLAQYQKDSRILFTAFADYWQGKSKLDRLV 238

Query: 220 YLAGHRSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPL 279
           +     +  R    +  +  ++   +P  +P ++ + +++L  ++   T  +  N + P 
Sbjct: 239 FSITPDASVRFAKIEKNECQVMPFPNPADLPRMKANKDINLMSKAGLNTGFLAFNTQKPP 298

Query: 280 LNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRH-LATAQT 338
           L++  VRQA+++AIN+  I  +V    G+ A  L  P  G W    + +   +    A+ 
Sbjct: 299 LDNVKVRQALAMAINKPAIIDAVFHGTGTAAKNLLPP--GVWGADSELKDYDYDPEKAKA 356

Query: 339 LLANQGWTLNDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNS 398
           LL   G+       +  E  A  VQ       P    +A  +QA   +IG+Q  I     
Sbjct: 357 LLKEAGFANG----VSVELWAMPVQ---RPYNPNAKRMAEMIQADWAKIGVQTKIVTYEW 409

Query: 399 SAIPAKHHDGTLEMALIARNFGTIADP---LPLLLSDFATHQGSDWGPTNWSSPQFSQLL 455
                +   G  + AL+     T  DP      L +  + + GS+     W    F +++
Sbjct: 410 GEYLKRVKGGEHQAALMGWTTAT-GDPDNFFGPLFTCTSANGGSN--SAKWCYKPFDKII 466

Query: 456 AELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDPF 508
           AE  + +D  +   L  +A Q++ D+MP + + +      V K V G+  DPF
Sbjct: 467 AEAKSTTDRDKRVALYKEAQQMMHDQMPAVMIAHSTIFEPVRKEVTGYEIDPF 519