Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., nickel ABC transporter substrate-binding protein from Escherichia coli ECRC62

 Score =  137 bits (346), Expect = 7e-37
 Identities = 123/474 (25%), Positives = 206/474 (43%), Gaps = 39/474 (8%)

Query: 60  LFSRLQVVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAAT 119
           +F++  V E LV    +    P LAKSWT S+DG  W F +R +V+F +G    A+AAA 
Sbjct: 49  MFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAE 108

Query: 120 ALNHALGKPG-------VIKQVPIKAITAQNDQVVIELNTVYRPLAAVLA----HYSLAI 168
                L             + V +KA++    ++ I L + Y P    LA       +A 
Sbjct: 109 NFRAVLDNRQRHAWLELANQIVDVKALS--KTELQITLKSAYYPFLQELALPRPFRFIAP 166

Query: 169 ASPSSYDASGNVIRLLGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETINYLAGHRSES 228
           +   +++    +   +GTGP+ + + +       +R   YWG+  +I+ I +       +
Sbjct: 167 SQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTT 226

Query: 229 RALLAQTGQADLVY------TLDPISIPSLQQSHNLDLYIESMP-RTVLIKLNNEHPLLN 281
           RA+  +TG  DL+Y       LD  +  S   +++  L   S P  TV++ LN      N
Sbjct: 227 RAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQL---SQPIETVMLALNTAKAPTN 283

Query: 282 HADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLA 341
              VR+A++ A+N++ +  + L      A  LF+P++   +L  K + Q     A+ LL 
Sbjct: 284 ELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPR-QYDPQKAKELLE 342

Query: 342 NQGWTL-NDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSA 400
             GWTL   + + E+ GQ  R++L           +A  +QA +++IG  V +  +  S+
Sbjct: 343 KAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGADVSLIGEEESS 402

Query: 401 IPAKHHDGTLEMALIARNFGTIADPLPLLLS-------DFATHQGSDWGPTNWSSPQFSQ 453
           I A+  DG   M +  R +G   DP   L S       DF   QG          P   +
Sbjct: 403 IYARQRDGRFGM-IFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLA------DKPLIDK 455

Query: 454 LLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
            + E+    D  + Q L       L DE   +P++Y   +V     +    + P
Sbjct: 456 EIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYAP 509