Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 127/539 (23%), Positives = 215/539 (39%), Gaps = 63/539 (11%)

Query: 12  LMKKRL--FGL-ILALGGAGIWLTKTEPAPSSLEISGPFEFNSQDLAKDGFLF--SRLQV 66
           LMK R+  F L +LAL  A     KT    S      P  FN Q L   G  F  S + +
Sbjct: 5   LMKSRVLKFSLGLLALSVAAGVQAKTLVYCSE---GSPEGFNPQ-LFTSGTTFDASSIPI 60

Query: 67  VESLVGI-NENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATA----- 120
              LV   N  ++  P LA+ W +S DG  + F +R +V++ D           A     
Sbjct: 61  YNRLVEFKNGTTEIEPGLAEKWDISADGKTYTFHLRKDVKWQDNKDFKPSRTFNADDVLF 120

Query: 121 -------LNH--------------ALGKPGVIKQVPIKAITAQNDQVVIELNTVYRPLAA 159
                   NH               +G P +I ++        +  V  +L     P  A
Sbjct: 121 SFQRQIDANHPFHKVSGGSYEYFEGMGMPDLIGKIE----KVDDYTVRFQLTRAEAPFLA 176

Query: 160 VLAHYSLAIASPSSYDA---SGNVIRL----LGTGPYQIAQLQAPHKASVIRFNAYWGKP 212
            LA    +I S    D    +G+  ++    +GTGP+Q+ Q Q   +    RF+++WG  
Sbjct: 177 DLAMDFASIMSAEYGDKMLKAGSPEKIDLDPIGTGPFQLQQYQKDSRILYKRFDSFWGTK 236

Query: 213 ASIETINYLAGHRSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIK 272
             I+ + +     +  R    Q  +  ++   +P  + +++Q  N++L  +       + 
Sbjct: 237 PGIDRLVFSITPDASVRYAKLQKDECQVMPYPNPADLTNMKQDKNIELLQKPGLNVGYLS 296

Query: 273 LNNEHPLLNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRH 332
            N E   L++  +RQA++ A+N++ I ++V +  G  A  L  P +  W   D  +   +
Sbjct: 297 FNVEKKPLDNVKIRQALTYAVNKQAIIEAVYQGAGQAAKNLIPPTM--WGYNDDVKDYAY 354

Query: 333 -LATAQTLLANQGWTLNDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQV 391
             A A+ LL   G     +   E +  A  VQ       P    +A  +QA   ++G++ 
Sbjct: 355 DPAKAKALLKEAGM----ENGFEIDLWAMPVQ---RPYNPNARRMAEMIQADWAKVGVKA 407

Query: 392 DIAIDNSSAIPAKHHDGTLEMALIARNFGTIADP---LPLLLSDFATHQGSDWGPTNWSS 448
            I          +   G  +  L+    G   DP   L  L S  A  +GS++  + W  
Sbjct: 408 KIVTYEWGEYLKRAKSGEHQTVLMGWT-GDNGDPDNFLATLFSCDAAKKGSNY--SKWCY 464

Query: 449 PQFSQLLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
             F  L+      SD A+  +L  QA  ++ D+ P + V +      + K V G+  +P
Sbjct: 465 KPFEDLIQPARAVSDQAKRIELYKQAQVVMHDQAPALIVAHSTVYEPIRKNVKGYVIEP 523