Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., nickel ABC transporter, nickel/metallophore periplasmic binding protein from Dickeya dianthicola ME23

 Score =  107 bits (268), Expect = 8e-28
 Identities = 114/480 (23%), Positives = 199/480 (41%), Gaps = 23/480 (4%)

Query: 58  GFLFSRLQVVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAA 117
           G + ++  V E LV IN      P LA SWT+S DG  + F +R +V+F DG  LTA   
Sbjct: 50  GEMAAQNMVFEPLV-INTPDGVKPWLAASWTISPDGKRYIFTLRRDVRFSDGEPLTADVV 108

Query: 118 ATALNHALGK------PGVIKQVP-IKAITAQNDQVVIELNTVYRPLAAVLAHYSLAIAS 170
              +   L          +++Q+  + A+     Q+ ++ N  Y  L  +         S
Sbjct: 109 KQNIEAVLDNYQRHAWLELVRQIDNVTALDRYRVQITLK-NPYYPTLIELGLTRPFRFVS 167

Query: 171 PSSY---DASGNVIRLLGTGPYQIAQLQAPHKASVIRFNAYWGKPASIETINYLAGHRSE 227
           P ++        +   +GTGP+ +A+ +    A  +    YWG    ++ + +      +
Sbjct: 168 PKAFIGGKTKDGITGYVGTGPWLLAEHKPNQYARFVANPDYWGTRPRLDGVVWRVMPDRQ 227

Query: 228 SRALLAQTGQADLVY-----TLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNH 282
           S  +  Q     L++      LD  S  +L+ + N    I     +  + LN+  P+   
Sbjct: 228 SMLMALQKETVQLIFGADGDMLDMDSFTALEVAGNYPTLISPPVASRALVLNSARPITGD 287

Query: 283 ADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLAN 342
             VRQA+  AI++  IA  ++    S A  L S  +    + D    + +     TLL  
Sbjct: 288 KAVRQALQYAIDKAAIAAGIMGNSESVADTLMSRRVPYCDI-DLPVYRFNPPLTGTLLEA 346

Query: 343 QGWTL-NDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAI 401
            GW L   + + E++G+A  + L    +      IA  +Q  LK +G+Q+ I  +   A 
Sbjct: 347 AGWHLAAGKTVREKQGKALALMLSYNRNNAAEREIAELIQDDLKRVGVQLTILGEEKQAF 406

Query: 402 PAKHHDGTLEMALIARNFGTIADPLPLLLSDFATHQGSDWGPTN--WSSPQFSQLLAELS 459
             +   G  ++   + ++GT  DP    +S F     +D+         P    L+ E+ 
Sbjct: 407 LDRQKSGDFDLQ-YSLSWGTPYDPAS-YISSFRIPAHADYQAQKALRRKPDIDNLIGEIL 464

Query: 460 TESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDPFEINYRVAQMSF 519
              +  + Q+   +   LLADE   IP+TY +       R+ G SF+  +      +M F
Sbjct: 465 LTPNEKQRQERYTRLFTLLADEAVYIPLTYSKTKAIYLSRLKGVSFNASQYEIPFEKMHF 524