Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor from Escherichia coli BL21

 Score =  101 bits (251), Expect = 8e-26
 Identities = 115/492 (23%), Positives = 196/492 (39%), Gaps = 72/492 (14%)

Query: 60  LFSRLQVVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAAT 119
           L++RL  VE  +G  E     P LA+ W VS+DG  + F +R  V++HD  +        
Sbjct: 60  LYNRL--VEFKIGTTE---VIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELN 114

Query: 120 ALN--------------------------HALGKPGVIKQVPIKAITAQNDQVVIELNTV 153
           A +                            +G P +I +V  K +     Q V+     
Sbjct: 115 ADDVVFSFDRQKNAQNPYHKVSGGSYEYFEGMGLPELISEV--KKVDDNTVQFVLT---- 168

Query: 154 YRPLAAVLAHYSLAIASPSSYDASGNVIRL----------LGTGPYQIAQLQAPHKASVI 203
            RP A  LA  ++  AS  S + +  +++           +GTGP+Q+ Q Q   +    
Sbjct: 169 -RPEAPFLADLAMDFASILSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYK 227

Query: 204 RFNAYWGKPASIETINYLAGHRSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIE 263
            F+ YWG    I+T+ +     +  R    Q  +  ++   +P  I  ++Q  +++L   
Sbjct: 228 AFDGYWGTKPQIDTLVFSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEM 287

Query: 264 SMPRTVLIKLNNEHPLLNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHL 323
                  +  N +   L+   VRQA++ A+N++ I ++V +  G  A  L  P +  W  
Sbjct: 288 PGLNVGYLSYNVQKKPLDDVKVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTM--WGY 345

Query: 324 ADKTQPQRH-LATAQTLLANQGWTLNDQGLLEREGQAFRVQLLTY-ADRPELP---LIAT 378
            D  Q   +    A+ LL   G        LE+    F + L      RP  P    +A 
Sbjct: 346 NDDVQDYTYDPEKAKALLKEAG--------LEK---GFSIDLWAMPVQRPYNPNARRMAE 394

Query: 379 ALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEMALIARNFGTIADP---LPLLLSDFAT 435
            +QA   ++G+Q  I          +  DG  +  ++    G   DP      L S  A+
Sbjct: 395 MIQADWAKVGVQAKIVTYEWGEYLKRAKDGEHQTVMMGWT-GDNGDPDNFFATLFSCAAS 453

Query: 436 HQGSDWGPTNWSSPQFSQLLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVS 495
            QGS++  + W    F  L+       D+ +  +L  QA  ++ D+ P + + +      
Sbjct: 454 EQGSNY--SKWCYKPFEDLIQPARATDDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEP 511

Query: 496 VNKRVAGFSFDP 507
           V K V G+  DP
Sbjct: 512 VRKEVKGYVVDP 523