Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., Periplasmic dipeptide transport protein from Azospirillum sp. SherDot2

 Score = 92.0 bits (227), Expect = 5e-23
 Identities = 127/542 (23%), Positives = 217/542 (40%), Gaps = 61/542 (11%)

Query: 13  MKKRLFGLILALGGAGIWLTKTEPAPSSLEI-----SGPFEFNSQDLAKDGFLFS-RLQV 66
           MK+ L G  L +  A   L  + PA ++  +       P  FN   L   G  F   L V
Sbjct: 1   MKRILLGAGLGMAAA---LALSAPAQAAKTLVYCSEGSPENFNPM-LNTTGTSFDVALPV 56

Query: 67  VESLVGINEN-SQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHAL 125
             +LV      ++  P LA+SWT+SDDGLV+ F++R   ++H          A A +   
Sbjct: 57  YNNLVQFEHGGTKVVPGLAESWTISDDGLVYTFKLRAGAKWHSVGDFKPTRDANADDVIF 116

Query: 126 G-----KP----------------GVIKQVPIKAITAQNDQVV-IELNTVYRPLAAVLAH 163
                 KP                 +     +K+I   +D  V   LN V  P  A LA 
Sbjct: 117 SFERQWKPEHPFHKISGGAYDYFNDMAMPKLLKSIEKVDDLTVKFTLNAVEAPFLANLAM 176

Query: 164 YSLAIASPSSYDA----SGNVIRL----LGTGPYQIAQLQAPHKASVIRFNA---YWGKP 212
               I S + Y A     G   +L    +GTGP+Q    Q   K +VIR+ A   YWG  
Sbjct: 177 PFAPIMS-AEYGAMLLKKGTPEKLDQVPVGTGPFQFVAYQ---KDAVIRYKAFEQYWGGK 232

Query: 213 ASIETINYLAGHRSESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIK 272
             ++ + +     +  R    +  +  ++   +P  I  +++  ++ +  +       + 
Sbjct: 233 QPLDNLVFAITPDAAVRLAKLKANECQIMPYPNPADIDGMKKDTSIVVQEQEGLNVGYVS 292

Query: 273 LNNEHPLLNHADVRQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRH 332
            N      +   VR+A+S+A++++    +V +  G  A     P + +++ A +  P   
Sbjct: 293 FNVTKKPFDDVRVRRAVSMALDKKATVAAVYQAAGVPAKNPIPPTMWSYNDAIEDYPY-D 351

Query: 333 LATAQTLLANQGWTLNDQGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVD 392
           +  A+ LLA+ G+        E +  A  VQ       P    +A  +QA L ++GI+  
Sbjct: 352 VERAKKLLADAGYPNG----FETDLWAMPVQR---PYNPNAKRVAEMMQADLAKVGIKAK 404

Query: 393 IAIDNSSAIPAKHHDGTLEMALIARNFGTIADP---LPLLLSDFATHQGSDWGPTNWSSP 449
           I          +   G  +M ++    G   DP   L  LL   A   G +   + W + 
Sbjct: 405 IVQYEWGEYRKRMQQGEHQMGMLGWT-GDNGDPDNFLYTLLGCEAARPGGN-NLSKWCNK 462

Query: 450 QFSQLLAELSTESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDPFE 509
           +F  L+ +    +D A   +L  QA  +  +E P   + +      + K V G+  DPF 
Sbjct: 463 EFDDLVVQAKRTTDIAARTKLYEQAQVIFKEEAPWYTIAHSVVYTGLAKNVVGYKMDPFG 522

Query: 510 IN 511
           ++
Sbjct: 523 VH 524