Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  100 bits (249), Expect = 1e-25
 Identities = 103/433 (23%), Positives = 187/433 (43%), Gaps = 42/433 (9%)

Query: 66  VVESLVGINENSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATALNHAL 125
           + E LV I+   +  P LA+SW +S DG  + F++R  V FHDG    +  A  +L+ A 
Sbjct: 72  IFEGLVTIDSKGKVKPQLAESWEISPDGKSYTFKLRKGVTFHDGEAFDSAVAKFSLDRAR 131

Query: 126 GKPGVIKQVPIKAI-----TAQNDQVVIELNTVYRPLAAVLAHYSLAIASPSSYDASGNV 180
           G+  V  Q    A      T   D +V++L      L   L   +  + +P S  A  N 
Sbjct: 132 GEASVNPQKRFFAAIDSIETPDADTLVLKLKQPAGSLIYWLGWPASVMVAPKS--AEANR 189

Query: 181 IRLLGTGPYQIAQLQAPHKASVIRFNAYWGKPASIE----TINYLAGHRSESRALLAQTG 236
              +GTGP++        K  + +  AYW K  +++    T  ++A  ++++ AL  ++G
Sbjct: 190 TTPVGTGPFKFVSWAKGDKVELEKNAAYWDKAVAVKLDKATFRFVADPQAQAAAL--KSG 247

Query: 237 QADLVYTLD-PISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQAISLAINR 295
             D       P  + S      L  ++ +    V+  +NN     N   VRQA+ +A++R
Sbjct: 248 DIDAFPEFGAPELMTSFDGDKRLGTFVGNTELKVVAGMNNARKPFNDKRVRQALMMAVDR 307

Query: 296 EGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQR-HLATAQTLLANQGWTLNDQGLLE 354
             + +      G+     ++P    +   D T      +  A+ LLA  G+         
Sbjct: 308 GTVIEGAWSGYGTAIGSHYTPNDRGY--VDTTGVHSFDIDKAKALLAEAGYA-------- 357

Query: 355 REGQAFRVQL--LTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGTLEM 412
            +G +F ++   + YA R      +  LQA L EIG+ + I    ++  PAK     L+ 
Sbjct: 358 -DGFSFTIKAPQMAYAQR-----TSQILQAMLAEIGVTMTI---ETTEFPAKWVADVLKG 408

Query: 413 ALIARNFGTIADPLPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARYQQLAA 472
           A         A+P+ + +         D    N+ +P F++++A +   ++    + L  
Sbjct: 409 ADYDMTIVAHAEPMDIDI------YARDPYYFNYKNPAFNEVIANVEKTANAGEQEALYG 462

Query: 473 QASQLLADEMPLI 485
            A ++LA+++P +
Sbjct: 463 DAQKILAEDVPAL 475