Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., dipeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 91.3 bits (225), Expect = 8e-23
 Identities = 105/468 (22%), Positives = 196/468 (41%), Gaps = 59/468 (12%)

Query: 81  PLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQAAATA--LNHALGKPGVIK------ 132
           P LA+ W VS DGL + F +R  V+FH   + T      A  +  +  + G  K      
Sbjct: 72  PGLAEKWDVSSDGLEYTFHLRKGVKFHSNDKFTPSRDFNADDVIFSYNRQGDTKNPWNQY 131

Query: 133 ------------QVP--IKAITAQNDQVVIELNTVYRPLAAVLAHYSLAIASPSSYDASG 178
                       ++P  IK I   +D  V  + T  RP A  LA+ ++  AS  S + + 
Sbjct: 132 IAGITYEYYNSMEMPSLIKEIVKVDDYTVKFVLT--RPEAPFLANIAMPFASIVSKEYAD 189

Query: 179 NVIRL----------LGTGPYQIAQLQAPHKASVIRFNA---YWGKPASIETINYLAGHR 225
            + +           +GTGP++    Q   K +VIR+     YWG    I+ + +     
Sbjct: 190 TLEKAGTKEDFNNLPIGTGPFKFVAYQ---KDAVIRYQKNADYWGDAPKIDDLIFAITPD 246

Query: 226 SESRALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADV 285
           +  R    + G+  L+    P  + +++   NL L  +          N      +  +V
Sbjct: 247 AAVRLQKLKAGECHLMPYPAPADLSTIRADKNLKLDEQPGLNVAYFAYNTTVAPFDKPEV 306

Query: 286 RQAISLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGW 345
           R+A+++A+N++ I  +V +  G+ A     P + +++ + K       A  + L A    
Sbjct: 307 RKALNMAMNKQAIIDAVFQGAGTVAKNPIPPTMWSYNDSIKDDAYDPEAAKKALEA---- 362

Query: 346 TLNDQGLLEREGQAFRVQLLTYADRPELP---LIATALQAQLKEIGIQVDIAIDNSSAIP 402
                G+ +   + + + +     RP +P     A  +Q+   ++G++ +I         
Sbjct: 363 ----AGVKDLTMKIWAMPV----QRPYMPNARRTAELIQSDFAKVGVKAEIVSFEWGEYL 414

Query: 403 AKHHDGTLEMALIARNFGTIADP---LPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELS 459
            K  +   + A+I    G   DP   + +LLS  AT +G       W + +FS+LL++  
Sbjct: 415 KKSTEVNRDGAVILGWTGDNGDPDNFMGVLLSCAATGEGGA-NRAQWCNKEFSELLSKAK 473

Query: 460 TESDNARYQQLAAQASQLLADEMPLIPVTYYRQIVSVNKRVAGFSFDP 507
             +D A   +L  QA  +  ++ P   + +  Q V ++ +V+GF+  P
Sbjct: 474 QTTDVAERTKLYEQAQVIFKEQAPWATLAHSTQFVPMSAKVSGFTMSP 521