Pairwise Alignments

Query, 521 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., peptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 108/513 (21%), Positives = 208/513 (40%), Gaps = 51/513 (9%)

Query: 22  LALGGAGIWLTKTEPAPSSLEISGPFEFNS------QDLAKDGFLFSRLQVVESLVGINE 75
           L L G  + +T    A   + I+   +  S      +D   DG +   L +VE LVG N 
Sbjct: 15  LLLAGVALLVTANFAAARDITIAQSSDLRSSNPGVNRDGNTDGVI---LHIVEGLVGYNN 71

Query: 76  NSQPYPLLAKSWTVSDDGLVWRFQIRPEVQFHDGSQLTAQ------------AAATALNH 123
             +  PLLA+S  V+ DGL + F++R +V+FH+G  LTA+                A  +
Sbjct: 72  AGEVKPLLAESVEVAPDGLAYTFKLRKDVKFHNGKPLTAEDVVWNWTRYLKPETKWACLN 131

Query: 124 ALGKPGVIKQVPIKAITAQNDQVVIEL-NTVYRPLAAVLAHYSLAIASPSSYDASGNVIR 182
              + G      +KA  A   Q+ +E  + V+  L +        + SP S  A G+ ++
Sbjct: 132 DFAEGGAAHVTAVKATDASTVQITLEKPSGVFLGLMSRPECGYTGMISPESVAADGSFVK 191

Query: 183 LLGTGPYQIAQLQAPHKASVIRFNAYW-----GKPASI--------ETINYLAGHRSESR 229
            +GTGP+Q  + +      + +F  Y      GKP  +        + I ++    + + 
Sbjct: 192 PIGTGPFQWDEWKKGEYIRLAKFADYISPANDGKPDGMVGSKRPLADGIKFMVIPDASTV 251

Query: 230 ALLAQTGQADLVYTLDPISIPSLQQSHNLDLYIESMPRTVLIKLNNEHPLLNHADVRQAI 289
               ++G  D    + P  IP  + +  + L +       L  +     +L++  VR+A+
Sbjct: 252 KAGLESGVLDTA-EISPDLIPEFKTNDKMQLIVSRNNGKNLFYIQTRDKVLSNPGVRRAM 310

Query: 290 SLAINREGIAQSVLKLPGSEAHQLFSPALGAWHLADKTQPQRHLATAQTLLANQGWTLND 349
           ++A++ + +  +     G     + S     +    K +P   +  A+  L   G+    
Sbjct: 311 AMALDLDELVAAASNGTGEANGSMVSQDSVYYDETQKRRPAYDVEAAKKELEAAGY---- 366

Query: 350 QGLLEREGQAFRVQLLTYADRPELPLIATALQAQLKEIGIQVDIAIDNSSAIPAKHHDGT 409
                 +G+   +      + P  P  A   QA +++ G+ V I + + +    +   G 
Sbjct: 367 ------KGEPISIIANKRGNVPSFP-AAVMAQAMMQQAGLNVQIEVLDYATQVDRRRSGN 419

Query: 410 LEMALIARNFGTIADPLPLLLSDFATHQGSDWGPTNWSSPQFSQLLAELSTESDNARYQQ 469
            +  +I+++     D  P L+  F            W  P+  +L+     E+D A+ Q+
Sbjct: 420 YQ--VISQSVAPRLD--PALMYAFYVGNKDKNASLMWDDPKAIELMKAAYVEADQAKRQR 475

Query: 470 LAAQASQLLADEMPLIPVTYYRQIVSVNKRVAG 502
           +  +  +L+  EMP I +     +    K++ G
Sbjct: 476 VFDEFHELMLKEMPGIFLYDMVDVWGATKKLKG 508