Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., chemotaxis protein CheA from Rhodanobacter sp000427505 FW510-R12

 Score =  569 bits (1467), Expect = e-166
 Identities = 323/705 (45%), Positives = 449/705 (63%), Gaps = 51/705 (7%)

Query: 3   LDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEI 62
           +D+ Q  K F  E  E L+ +E  LL LD    D E+++TIFRAAHSIKGGA TF   ++
Sbjct: 4   VDLTQFHKTFFEESLEGLDAMEAALLALDSGSTDHELVHTIFRAAHSIKGGAATFGFADV 63

Query: 63  SEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAE 122
           + FTH  E+ L+ +R++++ +    VD LL+S D +R ML          +A  + +  E
Sbjct: 64  AAFTHVAESLLEEVRSERRAVDTALVDLLLRSVDCLRAMLARSAGGQPAADADSETLRGE 123

Query: 123 LQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSGND 182
           L  L + +        A P             A+A   A+A GW IRFV    L  +GND
Sbjct: 124 LLRLASGEAV------AAPA------------AVASGVASASGWDIRFVALPHLLQTGND 165

Query: 183 PLRILRELRELGS---EYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRELFD 239
           PLR+ REL +LG         LD  A   LAE+DP  C+L W +RL G V+  DV  +FD
Sbjct: 166 PLRLFRELEQLGRLEVRRAFVLD-SAPARLAELDPSQCHLGWELRLHGAVARGDVDAVFD 224

Query: 240 WVEDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVA 299
           W++ +C+L I               +A P  T      T  +PVA+   PA  P  A  A
Sbjct: 225 WLDGDCELAI---------------EALPGET----SATAADPVAMA-APATAPVPAAAA 264

Query: 300 PVIANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKL 359
           P     +E+AT + A  + S  SIRV ++KVD LIN++GELVITQSML+++G +F   +L
Sbjct: 265 PPA---RETATVRAASGEGS--SIRVGVDKVDALINMMGELVITQSMLSDIGENFRPSQL 319

Query: 360 DKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQT 419
           ++L+ GL QL + +++LQE+V+ IRMLP+   F+RFPRLVRDL  +LGK+V L++ GE T
Sbjct: 320 ERLREGLLQLERTTRELQESVMRIRMLPIGSVFNRFPRLVRDLERKLGKQVRLELHGEHT 379

Query: 420 ELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISD 479
           ELDKTVLE+I DPLVHLVRN IDHG+E+P  R A GKPE G + L A+H+GG+I+V+ISD
Sbjct: 380 ELDKTVLEKIGDPLVHLVRNAIDHGLELPAQRKAAGKPENGTLKLNAYHEGGNIVVQISD 439

Query: 480 DGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMD 539
           DGAG++   +  KA ++G+L    + S   D ++  LIF PGFSTA Q +D+SGRGVGMD
Sbjct: 440 DGAGLNRAAIVAKAQQRGLLGAGQEPS---DAEVAELIFQPGFSTAAQATDLSGRGVGMD 496

Query: 540 VVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQ 599
           VVRRN+ +LGG + V SE G+GS FTI+LPLTLAI+DG +  V D+ Y++PL +IVES++
Sbjct: 497 VVRRNVRDLGGSVGVKSEAGKGSVFTIALPLTLAIIDGLVTAVGDERYIVPLTSIVESLR 556

Query: 600 INTASVKHAAGGIELYRLREENIPILRLQDELAMGRS-GSLEKRLICFVESAGHRVGLLV 658
           +   +V+   GG E++  REE +PI+RL        +   +E+ ++  +E AG R+GLLV
Sbjct: 557 LKPEAVRRITGGGEVFHFREEYLPIMRLHRAFGCADAVTEIERGIVVVIEDAGRRMGLLV 616

Query: 659 DDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLI 703
           DDLL QQQ VIKSL+++Y +V GISGATIL DGSV+LI+D+ G++
Sbjct: 617 DDLLGQQQAVIKSLDAHYRRVQGISGATILSDGSVALIVDVGGVV 661