Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 735 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417

 Score =  352 bits (903), Expect = e-101
 Identities = 237/745 (31%), Positives = 386/745 (51%), Gaps = 59/745 (7%)

Query: 6   EQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEISEF 65
           E++ + F VE  E LE L  +L++L+    D  +LN IFR  H++KGGAG   LHE+ E 
Sbjct: 7   EEILQDFLVEAGEILEQLSEQLVELESRPDDANLLNAIFRGFHTVKGGAGFLQLHELVEC 66

Query: 66  THAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGA---- 121
            H  E   D++R  ++ + ++ +D +L++ D +  M     +   I  A  + + A    
Sbjct: 67  CHIAENVFDILRKGERHVDSELMDVILEALDAVNGMFSEVRERAPITAATPELLAALARY 126

Query: 122 ----ELQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIP-DATAQGWRIRFVPHETL 176
               +L A    + A   +++A+P  +++    +     A+  +A A    +     E +
Sbjct: 127 AEPADLSAAPVAEAAPEPVAEAEPDVTDSEFEQLLNSLSAVKAEAEAPAAAVAAPTSEDI 186

Query: 177 FYSGNDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRE 236
             +  + L     L +L  + Q   D      ++E        + T     D+++++   
Sbjct: 187 TDAEFESL-----LDQLHGKGQFAADAVTPAAVSEAPA-----APTANANTDITDDEFEA 236

Query: 237 LFDWVEDE------------------CDLHIAP----ILSDEASAHVEDE--------QA 266
           L D +  +                       AP    ++SD     + DE        + 
Sbjct: 237 LLDQLHGKGTFVADALPEVAATAAAPAAASAAPAGDGLISDHEFESLLDELHGKGKFSEV 296

Query: 267 APAATLQSNPQTQVEPVAIVDLPAVEP-PVATVAPVIANPKESATNKPAKTDSSVSSIRV 325
           APAAT+ +      +  A    PA +P P A  AP  A     A +KPA    + +++RV
Sbjct: 297 APAATVATAAPVAAKAAAPAPAPAAKPAPAAAPAPARAAAAPVA-DKPAS--EAETTVRV 353

Query: 326 DIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVLNIRM 385
           D  ++D+++N+VGELV+ ++ L  LG     + + K  + L  +   + DLQ  V+  RM
Sbjct: 354 DTARLDDIMNMVGELVLVRNRLVRLGLSSGDEAMQKAVSNLDVV---TADLQTAVMKTRM 410

Query: 386 LPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGIDHGV 445
            P+   F RFPRLVRDL  +L K+++L++ GE+T+LDK ++E + DPLVHLVRN +DHGV
Sbjct: 411 QPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGV 470

Query: 446 EMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEPQTQR 505
           E P+ R A GK   G + L A  +G  I++ I+DDG G+D   L   AV++GV++ +   
Sbjct: 471 ETPEEREASGKSRNGKVILAAEQEGDHILLSITDDGKGMDPAILRNIAVKRGVMD-KDAA 529

Query: 506 SDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVDSELGRGSRFT 565
             LTD +  NLIFAPGFST  ++SD+SGRGVGMDVV+  I +L G I + S  G+GS+  
Sbjct: 530 DRLTDSECYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIYSTKGQGSKIV 589

Query: 566 ISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVKHAAGGIELYRLREENIPIL 625
           I +PLTLAI+   +V + +Q +  PL+ + E   ++  S  +   G E+  +R++ +P+ 
Sbjct: 590 IKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLD-LSRTNVVDGQEVVIVRDKALPLF 648

Query: 626 RLQDELAMGRSGSLEKRLICFVESAG-HRVGLLVDDLLDQQQVVIKSLESNYAKVAGISG 684
            L+  L        ++     + S G  R+G +VD L+ Q++VVIK L        G+SG
Sbjct: 649 YLKRWLVASAKHEEQREGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSG 708

Query: 685 ATILGDGSVSLILDIPGLIAHFMKR 709
           ATI GDG ++LILD+P ++  +  R
Sbjct: 709 ATITGDGRIALILDVPSMLKRYAAR 733