Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

 Score =  465 bits (1197), Expect = e-135
 Identities = 289/702 (41%), Positives = 410/702 (58%), Gaps = 38/702 (5%)

Query: 3   LDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEI 62
           +D+ Q  + F VE  E L  +E  LL LD    D E LN IFRAAHSIKGGA TF    +
Sbjct: 1   MDLSQFTQAFFVEAIELLAEMEQLLLDLDVEAPDSEQLNAIFRAAHSIKGGAATFGFTAL 60

Query: 63  SEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAE 122
           +  TH +ET LD  R+ +  L  + +D  L++ D ++  L + +     +  +   +   
Sbjct: 61  TNTTHVLETLLDRARHGQLSLNGRMIDAFLETKDALQEQLTAYQAGQEPNPDMVAHICGV 120

Query: 123 LQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSGND 182
           LQ L  + G + + + A   ++    + + A A A   A A        P E    +G+ 
Sbjct: 121 LQQLALESGDESLAAHAAATAA---AAPVAAPAPAPVAAAA--------PAEAAVPAGDG 169

Query: 183 PLRILRELRELGSEYQIELDHQALPELAEIDPELCYL----SWTIRLTGDVSENDVRELF 238
            LRI R  R   SE  +        EL+ +   L         T+ L      +D+  + 
Sbjct: 170 VLRI-RFARLSDSECDL-----LAGELSNLGKVLSRTRSNDQLTVLLETTCDPDDIVAVC 223

Query: 239 DWVEDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATV 298
            +V DE  + I     + A+A V  E AAPA   ++       P     + A   PVA  
Sbjct: 224 CFVIDESQIDIT---REAAAAVVAPEPAAPAPAAEA-------PAKAPAVVAAAAPVAQA 273

Query: 299 APVIANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDK 358
           AP  A P  +A    A      SSIRVD+EKVD LINLVGELVITQSMLT+         
Sbjct: 274 AP--AAPAATAAPAAAAGTKESSSIRVDVEKVDQLINLVGELVITQSMLTQAATMLDPVA 331

Query: 359 LDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQ 418
            ++  +GL  L +N++DLQE+V++IRM+PM + FSRFPR++RD+  +LGK+V L   G++
Sbjct: 332 YERFLSGLGHLERNARDLQESVMSIRMMPMDYVFSRFPRVIRDVSAKLGKQVRLDTYGKE 391

Query: 419 TELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEIS 478
           TELDK ++ERIVDPL HLVRN +DHG+E PDVRLAKGK  TG + L A H GG+I++E+S
Sbjct: 392 TELDKGLIERIVDPLTHLVRNSLDHGIETPDVRLAKGKDATGQLLLSAQHHGGNIVIEVS 451

Query: 479 DDGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGM 538
           DDGAG++ +++  KA+++G+   +T    + D+++  LIFAPGFSTAEQV+DISGRGVGM
Sbjct: 452 DDGAGLNRERILAKALQQGLPVSET----MPDEEVWQLIFAPGFSTAEQVTDISGRGVGM 507

Query: 539 DVVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESI 598
           DVV+RNI+E+GG +E+ S  G+G+   I LPLTLAIL+G  VKV D+ Y++PL  ++ES+
Sbjct: 508 DVVKRNIQEMGGHVEIHSRGGQGTTTRIVLPLTLAILNGMSVKVGDEAYILPLSYVIESL 567

Query: 599 QINTASVKHAAGGIELYRLREENIPILRLQDEL-AMGRSGSLEKRLICFVESAGHRVGLL 657
           Q     +        + R+R E +P++ L       G      + ++  V++   R  LL
Sbjct: 568 QPLPEHLHSITADGHVIRVRGEYLPLIELHRVFDVAGAQTHPTQGILVIVQADDSRFALL 627

Query: 658 VDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDI 699
           VD+LL Q QVV+K+LE+NY KV GIS ATILGDGSV+ I+D+
Sbjct: 628 VDELLGQHQVVVKNLETNYRKVPGISAATILGDGSVAFIIDV 669