Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  324 bits (831), Expect = 9e-93
 Identities = 185/476 (38%), Positives = 284/476 (59%), Gaps = 14/476 (2%)

Query: 243 DECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAPVI 302
           +E ++   P+ S   S+  +    A A + +   +   +P A     A E P    AP  
Sbjct: 314 EELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAAKPAVAKEEPAKAPAPAA 373

Query: 303 ANP----KESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDK 358
                  +E A    AK   + S++RVD   +D ++N+VGELV+ ++ L  LG + + ++
Sbjct: 374 VKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVLVRNRLLSLGLNSNDEE 433

Query: 359 LDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQ 418
           + K  A L  +   + DLQ  V+  RM P+   F RFPR+VRDL   L K++DL+++GE+
Sbjct: 434 MSKAVANLDVV---TADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEE 490

Query: 419 TELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEIS 478
           T+LDK ++E + DPL+HLVRN +DHG+EMPD R   GK  TG + L A  +G  I + I 
Sbjct: 491 TDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIV 550

Query: 479 DDGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGM 538
           DDGAG+D DKL   AV++G+++ +   + LT+K+  NLIF PGFS+ E+++DISGRGVGM
Sbjct: 551 DDGAGMDPDKLRGIAVKRGIMD-EDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGM 609

Query: 539 DVVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESI 598
           DVV+  I  L G I++DS +G+G++ TI +PLTLAIL   +V VA   + +PL ++ E  
Sbjct: 610 DVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIF 669

Query: 599 QINTASVKHAAGGIELYRLREENIPILRLQDELAMGRSGSLEKRL----ICFVESAGHRV 654
            ++        G + +  +RE++IP+  LQ+ LA  + G ++ R     +  V+    RV
Sbjct: 670 HLDLRRTNVVDGQLTII-VREKSIPLFYLQNWLA-PKKGKVQLRQGHGHVVIVQIGSQRV 727

Query: 655 GLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIAHFMKRS 710
           GL+VD L+ Q++VVIK L+       G+SGATI  DG ++LILD+P L+  +   S
Sbjct: 728 GLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDLLKQYAAAS 783



 Score = 72.8 bits (177), Expect = 6e-17
 Identities = 36/109 (33%), Positives = 62/109 (56%)

Query: 6   EQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEISEF 65
           E + + F VE  E LE L  +L++L+ +  D ++LN IFR  H++KGGAG   L E+ E 
Sbjct: 7   EDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVET 66

Query: 66  THAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEA 114
            H  E   D++RN ++ ++   +DT+LK+ D +     + ++   +  A
Sbjct: 67  CHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPA 115