Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 789 a.a., Signal transduction histidine kinase CheA from Sphingobium sp. HT1-2

 Score =  244 bits (622), Expect = 2e-68
 Identities = 148/418 (35%), Positives = 237/418 (56%), Gaps = 8/418 (1%)

Query: 288 LPAVEPPVATVAPVIANPKESATNKPA-KTDSSVSSIRVDIEKVDNLINLVGELVITQSM 346
           L  VE P A  A   A P+E A    A +   ++ +IR+ +  +D L+N V ++V+ ++ 
Sbjct: 119 LTQVEAPAAPAAE--AEPEEPAVPVAAVRQGQALRTIRLPLSLIDQLMNGVSDMVLARNE 176

Query: 347 LTELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRL 406
           L+    D S D   +L +   +L     D+++ +   RM  +   F+  PR+VRDL   L
Sbjct: 177 LSRKLRDRSADP--ELDSAFERLSTCVADMRDVISKTRMQRVERLFAAMPRMVRDLSRDL 234

Query: 407 GKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKA 466
            K+++L ++G   E+D+ ++E +VDPL H+VRN IDHG+E P+ R A GKPE G + L+A
Sbjct: 235 DKRIELSLEGGDVEMDREMVEMVVDPLTHIVRNSIDHGIETPERRRAAGKPEAGRLRLEA 294

Query: 467 FHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAE 526
              G  I++EISDDGAGI+  +L  KA+  G L P    + +T++  ++LIF PG +TA 
Sbjct: 295 RQSGNQIVIEISDDGAGINTARLVEKAIAAGRLTPDA-AARMTEQDKLDLIFQPGLTTAA 353

Query: 527 QVSDISGRGVGMDVVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQV 586
           +V+ +SGRGVGMDVVR NIE +GG I +D+  G+G R T+ +PLTL I+ G +V+     
Sbjct: 354 KVTAVSGRGVGMDVVRANIERIGGVIALDNHPGQGLRITLRVPLTLTIIPGLIVRAGGLH 413

Query: 587 YVIPLLTIVESIQINTASVKHA-AGGIELYRLREENIPILRLQDELAMGRSGSLEKRLIC 645
           + IP   +VE +  N   ++ A  GG ++  +R     ++ L+D L M +   +  R + 
Sbjct: 414 FAIPRAAVVEILHDNNEMMQIADVGGAKIATIRSIRHSMIDLEDVLGMDKPQQIGPRAVM 473

Query: 646 FVESA-GHRVGLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGL 702
            V SA G    + V  + + +++VI+            +G T+  +G   L+LD  GL
Sbjct: 474 VVRSATGVPFAMGVSAVENHEELVIRPASPLVMASGVYAGMTLPDNGKPMLLLDAAGL 531



 Score = 53.5 bits (127), Expect = 4e-11
 Identities = 32/107 (29%), Positives = 54/107 (50%)

Query: 5   MEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEISE 64
           M++L + F  E +E LE L GE++  + +  D + L+ IFR  H++KG  G  NL    +
Sbjct: 1   MDELLQEFISETQETLEALAGEVVAWEANPGDSQRLDAIFRFFHTVKGSCGFLNLPRFEK 60

Query: 65  FTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAI 111
            +HA E  L  IR   ++     V  +L   D I  + ++  +  A+
Sbjct: 61  LSHAAEDVLSEIRAGNRKPDPATVSAVLAIMDRIGELAEAVARGAAL 107