Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  223 bits (568), Expect = 3e-62
 Identities = 145/459 (31%), Positives = 242/459 (52%), Gaps = 28/459 (6%)

Query: 270 ATLQSNPQTQVEPVAIVDL--------PAVEPPVATVAPVIANPKESATNKPAKTDSSVS 321
           A    NP  + +P     L        PA EPP A  AP  A P      +      S  
Sbjct: 104 AVADGNPPAEPDPALCAALAAALRGPQPATEPPPAP-APASAPPAAEPPPQAEVRLKSAD 162

Query: 322 SIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDKLKAGLAQLLQN-SKDLQENV 380
           ++RV + K+D LI L+GE+V + + L +   D    + +    G A  L   ++DL+E+V
Sbjct: 163 TVRVQLTKLDELIRLMGEVVSSHARLRQRLTDIRQIERETQDRGEAAALTGFARDLREDV 222

Query: 381 LN--------------IRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVL 426
            +              +RMLP++       RL+RDL   LGK V+  + G + ELD+ ++
Sbjct: 223 FSQELLMDELHAKALVMRMLPLAIVLEPAARLIRDLGRSLGKDVECVVGGTEIELDRQLI 282

Query: 427 ERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDC 486
           +R+ DP+VHL+RN +DHG+E    R A GKP  G I L A   GG +++E++DDG G+  
Sbjct: 283 DRLNDPIVHLLRNSVDHGIEDAATRQAAGKPPFGTIRLSARQDGGWVLIEVADDGGGLPL 342

Query: 487 DKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNI- 545
             +  KAV KG+L  + Q + + D + I+LIF+PGFST+  ++++SGRGVGMDVV+R I 
Sbjct: 343 AAIRDKAVRKGLLSAE-QAAAMPDSEAIDLIFSPGFSTSSIITEVSGRGVGMDVVKRTIV 401

Query: 546 EELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASV 605
           ++L G I V++  G+G+ F + LPL+LA++   +V    + +      + + +++    +
Sbjct: 402 DDLQGVIGVETVPGKGTTFALRLPLSLAVMRVLVVSAGGESFGFTAQYVAQLLELPPERL 461

Query: 606 KHAAGGIELYRLREENIPILRLQDELAM-GRSGSLEKRLICFVESAGHRVGLLVDDLLDQ 664
              A   +   +  E IP++ L   L + G   +     +  V     ++ LLVD+L+D+
Sbjct: 462 LTVAER-DAVVIDNEFIPVVSLATLLGLPGARPARPVLRLVVVRVRNEKLALLVDELIDE 520

Query: 665 QQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLI 703
           + +VIK L  +   +  ++G  + G  ++  +L  P L+
Sbjct: 521 RDMVIKPLPEHLRHLPLVAGMVMTGRNTLVSVLHAPVLL 559



 Score = 64.3 bits (155), Expect = 2e-14
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 7/122 (5%)

Query: 1   MALDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLH 60
           MALD+++    F  E R++L  +E  L  LD +  D E +N +FR+AH++KG +    L 
Sbjct: 1   MALDIKRFTARFVDEARDHLRKVEDGLATLDSTPADSETINAVFRSAHTVKGSSRMLKLI 60

Query: 61  EISEFTHAVETYLDLIRN-------QKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDE 113
            I+E  H VE  L  +R+       + ++L  +GVD L    D + +     E + A+  
Sbjct: 61  PITETAHKVEDVLGALRDGSLSWSPELRRLLQRGVDALSAQVDAVADGNPPAEPDPALCA 120

Query: 114 AL 115
           AL
Sbjct: 121 AL 122