Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 767 a.a., hybrid sensor histidine kinase/response regulator from Magnetospirillum magneticum AMB-1

 Score =  203 bits (516), Expect = 3e-56
 Identities = 125/389 (32%), Positives = 207/389 (53%), Gaps = 6/389 (1%)

Query: 326 DIEKVDNLINLVGELVITQSMLTELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVLNIRM 385
           D+   D  I L  +    +  LT +  +    +  + + G A L Q   DLQ+ V  +RM
Sbjct: 248 DLGDYDRAIALERQYEALEQSLTGISRELRSVRRRQQRTGWA-LRQLGNDLQQEVRQVRM 306

Query: 386 LPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGIDHGV 445
           +P    F  F ++VRDL   +GK+V +Q+ G   E D+ VL+ + DP++HL+RN + HGV
Sbjct: 307 VPAESIFGAFRKMVRDLARAVGKQVTVQVSGLDVEADRMVLQGLKDPVMHLLRNALSHGV 366

Query: 446 EMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEPQTQR 505
           E PD R A+GK     ++L      G ++V I DDG G++ + + RKAVE+G+   + Q 
Sbjct: 367 EPPDERRAEGKSPAAHVSLSFDVSEGRLVVTIEDDGRGVNFEAIRRKAVERGLFS-EAQS 425

Query: 506 SDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVDSELGRGSRFT 565
            D+  + +I++IF PGFSTA  V D+SGRG+G+ VVR  +  + G +EV      G+ F 
Sbjct: 426 FDVDRQSLIDVIFDPGFSTARVVDDLSGRGMGLSVVREAMAMMNGTVEVQDRKPMGTCFR 485

Query: 566 ISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVKHAAGGIELYRLREENIPIL 625
           +SLPLT++     LV+    VY +P   +    ++    V    G   ++ L +  IP+L
Sbjct: 486 LSLPLTVSTQRLFLVECQGHVYGLPTEGVDRLYRVRAEDVGTVEGKSVVF-LGDRQIPLL 544

Query: 626 RLQDELAMGRSGSLEKRLI---CFVESAGHRVGLLVDDLLDQQQVVIKSLESNYAKVAGI 682
            L   LA+G S     R +     +++   RV + +D  L  ++ ++K +    A+   +
Sbjct: 545 SLAHLLALGESAVKVTRNVVPLVVLKNGERRVAVAIDGFLSIREGLVKDIGVPGARGTMV 604

Query: 683 SGATILGDGSVSLILDIPGLIAHFMKRSS 711
           +G  +L DG ++L+L+   ++  F K  S
Sbjct: 605 AGGVLLEDGDIALVLNPFEIVETFRKSGS 633



 Score = 44.3 bits (103), Expect = 2e-08
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 6  EQLRKIFHVECRENLETLEGEL--LQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEIS 63
          E+L + F +E RE++E +   L  L+       L  L+ IFR AHS+KG +   +L  + 
Sbjct: 6  ERLLQAFQIEYREHVEAIRTLLDGLEHKAEGSGLAQLDEIFRRAHSLKGASRAVDLPAVE 65

Query: 64 EFTHAVETYLDLIRNQKKQL 83
          E +H +ET    +R+ + +L
Sbjct: 66 EISHRMETLFAKVRSGQAKL 85