Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 2142 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  108 bits (271), Expect = 2e-27
 Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 3/189 (1%)

Query: 383  IRMLPMSFAFSRFPRLVRDLCGRLGKKV-DLQIQG-EQTELDKTVLERIVDPLVHLVRNG 440
            +R  P+    S     V  +  RL K V  ++I G E   +D       +  L H+ RN 
Sbjct: 1948 LRKTPLCDTLSGHRNTVAQVAARLEKNVAPVEISGGEDIWIDPKTFAPFLRSLAHVFRNA 2007

Query: 441  IDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLE 500
            + HG+E PD RL  GK E+G IT K      SI + I+DDG GID   +  + VE G++ 
Sbjct: 2008 VTHGIEDPDSRLLAGKNESGRITCKVGRTADSIHLSIADDGVGIDQGAVRTRVVEAGLM- 2066

Query: 501  PQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVDSELGR 560
            P    + +T+ Q+++LIF    +T   +   SGRGVG+  VR    +LGG + V +  G+
Sbjct: 2067 PAEAVAAMTEAQVLDLIFLDSMTTNVHLDQFSGRGVGLAAVRAETAKLGGTVAVRTRPGQ 2126

Query: 561  GSRFTISLP 569
            G+ F  +LP
Sbjct: 2127 GTEFVFTLP 2135