Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 886 a.a., ATPase from Magnetospirillum magneticum AMB-1

 Score =  309 bits (792), Expect = 3e-88
 Identities = 182/448 (40%), Positives = 275/448 (61%), Gaps = 32/448 (7%)

Query: 269 AATLQSNPQTQVEPVAI---VDLPAVEPPVATVAPVI--ANPKESATNKPAKTDSSVSSI 323
           AA  +  P+ + EPV        P   PP A  AP +     KESA         +  +I
Sbjct: 157 AAAPEPEPEPEPEPVKASVPATTPQPSPPAAAAAPPVPAGEAKESAV--------AAQTI 208

Query: 324 RVDIEKVDNLINLVGELVITQSMLTEL--GNDFSMDKLDKLKAGLAQLLQNSKDLQENVL 381
           RV++E ++NL+ LV ELV+T++ L ++  G D S     +    L +L   + DLQE V+
Sbjct: 209 RVNVELLENLMTLVSELVLTRNQLLQMVRGKDDS-----EFATPLQRLSHITTDLQEGVM 263

Query: 382 NIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGI 441
             RM P+  A+++ PR+VRDL   + KK+DLQ+ G +TELD+ VLE I DPL H+VRN  
Sbjct: 264 KTRMQPIGNAWAKLPRIVRDLAVEMNKKIDLQMLGAETELDRQVLELIKDPLTHMVRNSA 323

Query: 442 DHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEP 501
           DHG+E  + R   GKPE G I L AFH+GG II+EISDDG G++ D++ +KA++ G L  
Sbjct: 324 DHGLEGTEERKRVGKPEIGKIVLNAFHEGGHIIIEISDDGRGLNLDRIKQKAIQNG-LAT 382

Query: 502 QTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVDSELGRG 561
           +++   LT +QI   IF  GFSTAE+V+ +SGRGVGMDVVR NIE++GG +E+ S+ G+G
Sbjct: 383 ESELEALTPQQIYQFIFKAGFSTAEKVTSVSGRGVGMDVVRTNIEKIGGTVELKSQPGKG 442

Query: 562 SRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQINTASVKHAAGGIEL------Y 615
           S F I +PLTLAI+   +V+ A + + IP ++++E +++ TA+ +H   GIE+       
Sbjct: 443 SSFIIKIPLTLAIVSALIVECAVERFAIPQISVLELVRV-TANSEH---GIEMINNAPVL 498

Query: 616 RLREENIPILRLQDELAMGRSGSLEKRLICFVESAG-HRVGLLVDDLLDQQQVVIKSLES 674
           RLR+  +P++ L+  L +  +   ++     V   G +  G++VD + D +++V+K +  
Sbjct: 499 RLRDRLLPLVSLKRLLKLAENDEEQQETFIVVTQVGTYTFGIIVDRVFDTEEIVVKPVAP 558

Query: 675 NYAKVAGISGATILGDGSVSLILDIPGL 702
               ++  SG TILGDGSV +ILD  G+
Sbjct: 559 ILRHISMFSGNTILGDGSVIMILDPNGI 586



 Score = 59.7 bits (143), Expect = 6e-13
 Identities = 37/122 (30%), Positives = 58/122 (47%)

Query: 5   MEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEISE 64
           M+ L   F  E  E+L  L+  L+ L+ +  D ++L  IFR  H+IKG  G   L  +  
Sbjct: 1   MDDLLSEFLTETSESLSVLDIALVNLEQNPNDPQILGNIFRLVHTIKGTCGFLGLPRLEH 60

Query: 65  FTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAELQ 124
             HA E  L   R+ + ++T   V  +L+S D I+ +L   EQ     E   + +   L 
Sbjct: 61  VAHAGENVLGKFRDGELEVTPDAVTLILQSIDRIKLILGHLEQNECEPEGSDEDLIERLN 120

Query: 125 AL 126
           A+
Sbjct: 121 AM 122