Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., chemotaxis protein CheA from Escherichia coli ECRC62

 Score =  459 bits (1181), Expect = e-133
 Identities = 281/705 (39%), Positives = 406/705 (57%), Gaps = 64/705 (9%)

Query: 1   MALDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLH 60
           +++D+    + F  E  E L  +E  LL L P   D E LN IFRAAHSIKGGAGTF   
Sbjct: 1   VSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60

Query: 61  EISEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVG 120
            + E TH +E  LD  R  + QL    ++  L++ D+++  LD+ +Q    D A    + 
Sbjct: 61  VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120

Query: 121 AELQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSG 180
             L+ L  +       ++ +  S+ T  S        +  +  Q  + R           
Sbjct: 121 QALRQLALE-------AKGETPSAVTRLS-------VVAKSEPQDEQSR----------S 156

Query: 181 NDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRELFDW 240
             P RI+    + G    +E +   L  L ++      LS    L GD++E+D+  +  +
Sbjct: 157 QSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI--LPGDIAEDDITAVLCF 214

Query: 241 VEDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAP 300
           V                   +E +Q     T++ +P+    PV  + L A + P   V  
Sbjct: 215 V-------------------IEADQIT-FETVEVSPKISTPPV--LKLAAEQAPTGRVE- 251

Query: 301 VIANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLD 360
                +E  T     T     SIRV +EKVD LINLVGELVITQSML +  ++       
Sbjct: 252 -----REKTTRSSEST-----SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301

Query: 361 KLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTE 420
            L   + QL +N++DLQE+V++IRM+PM + FSR+PRLVRDL G+LGK+V+L + G  TE
Sbjct: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361

Query: 421 LDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDD 480
           LDK+++ERI+DPL HLVRN +DHG+E+P+ RLA GK   G + L A HQGG+I +E++DD
Sbjct: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421

Query: 481 GAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDV 540
           GAG++ +++  KA  +G+    T   +++D ++  LIFAPGFSTAEQV+D+SGRGVGMDV
Sbjct: 422 GAGLNRERILAKAASQGL----TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477

Query: 541 VRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQI 600
           V+RNI+E+GG +E+ S+ G G+   I LPLTLAILDG  V+VAD+V+++PL  ++ES+Q 
Sbjct: 478 VKRNIQEMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537

Query: 601 NTASVKHAAGGIELYRLREENIPILRLQDEL-AMGRSGSLEKRLICFVESAGHRVGLLVD 659
             A +   AGG  +  +R E +PI+ L       G      + ++  ++S G R  LLVD
Sbjct: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597

Query: 660 DLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIA 704
            L+ Q QVV+K+LESNY KV GIS ATILGDGSV+LI+D+  L A
Sbjct: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642