Pairwise Alignments

Query, 720 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 737 a.a., Chemotaxis protein histidine kinase from Agrobacterium fabrum C58

 Score =  450 bits (1158), Expect = e-130
 Identities = 267/725 (36%), Positives = 413/725 (56%), Gaps = 48/725 (6%)

Query: 23  LEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLHEISEFTHAVETYLDLIRNQKKQ 82
           +E  LL+L+    D E +N +FRA HSIKGGAG F L ++  F H  ET LD +R+ K +
Sbjct: 1   MESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVAFAHVFETTLDCVRSNKLE 60

Query: 83  LTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVGAELQALL------ADQGADRVM 136
            T   +  +L+S DV+ ++ ++     ++DE+  + +  EL+AL       A   A   +
Sbjct: 61  PTQDVLKVMLRSADVLADLTNAARDGGSVDESRTRGLVKELEALANGEAVPASAPAPVAV 120

Query: 137 SQAQPVSSN-----THTSNMHADAIAIPDATAQG--------WRIRFVPHETLFYSGNDP 183
              +PV +      T  S       +  D   +         ++I F PH +L+  GN+ 
Sbjct: 121 KAPEPVKAPAAPKPTDESGFEPIPFSFSDFADETTPLMEVPTFQITFKPHASLYSKGNEA 180

Query: 184 LRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRELFDWVED 243
             +LR+L  +G +  +  D   LP L ++DPE  YLSWT+ +  +  E  +R +F++ E 
Sbjct: 181 ALLLRDLSRIG-DMSVNCDMSDLPALDKLDPEASYLSWTVSIATEKGEEGIRSVFEFAEW 239

Query: 244 ECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPP--VATVAPV 301
           +CDL I  ++SD ASA  E+    P     S      +    V  PA+E     ATV   
Sbjct: 240 DCDLEITAVVSD-ASADEEELPMIPVPFDLSALDGDAQDEPAVATPAMEDAYVAATVEAA 298

Query: 302 IANP-----------KESATNKPAKTDSSVSS---------IRVDIEKVDNLINLVGELV 341
           +A             K  A   PA   ++ ++         IRVD+++VD LINLVGELV
Sbjct: 299 VATTQIAQSVNAAIEKREAAAAPAAAQANANAAANASAGQTIRVDLDRVDRLINLVGELV 358

Query: 342 ITQSMLTELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRD 401
           I Q+ML++   +        +  GL +L Q ++++Q++V+ IR  P+   F R  R+VR+
Sbjct: 359 INQAMLSQSVIENDASGTSAVNMGLDELQQLTREIQDSVMAIRAQPVKPVFQRMSRIVRE 418

Query: 402 LCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGV 461
           +   +GK++ L  +GE TE+DKTV++++ +PL H++RN +DHG+E P+ R A GK   G 
Sbjct: 419 VADMIGKQIRLVTEGENTEVDKTVIDKLAEPLTHMIRNAVDHGIETPEKREAAGKNPEGT 478

Query: 462 ITLKAFHQGGSIIVEISDDGAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPG 521
           I L A H+ G I++E+ DDGAGI+ +++ +KA++  ++      ++LTD++I NLIFAPG
Sbjct: 479 IKLSAKHRSGRILIELQDDGAGINRERVRQKAIDNDLIAAD---ANLTDEEIDNLIFAPG 535

Query: 522 FSTAEQVSDISGRGVGMDVVRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVK 581
           FSTA+++SDISGRGVGMDVV+R+I+ LGG+I + S  G GS FT+SLPLTLA+LDG +V 
Sbjct: 536 FSTADKISDISGRGVGMDVVKRSIQALGGRISISSRPGLGSTFTMSLPLTLAVLDGMVVT 595

Query: 582 VADQVYVIPLLTIVESIQINTASVKHAAGGIELYRLREENIPILRLQDELAM--GRSGSL 639
           VA Q  V+PL  IVE++Q    ++        L  +R    P++ +   L     ++  +
Sbjct: 596 VAGQTLVVPLTAIVETLQPEAKNIHSFGSNQRLISIRNSFCPLVDVGRVLNFRPTQADPV 655

Query: 640 EKRLICFVESAGHRVGLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDI 699
           E   +      G +  L+VD +  Q+QVVIKSLE+NY  V GI+ ATILGDG V+LILD+
Sbjct: 656 EGVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVPGIAAATILGDGRVALILDV 715

Query: 700 PGLIA 704
             +++
Sbjct: 716 DAIVS 720