Pairwise Alignments

Query, 175 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 66.6 bits (161), Expect = 6e-16
 Identities = 41/135 (30%), Positives = 77/135 (57%), Gaps = 8/135 (5%)

Query: 33  FMLGTELYGVTLSHVEEI-RVWEKPTPIPRAPHFVKGVINLRGMIVPIIDLRQRFGLTQY 91
           F L  E +G+++  V+EI R+ E  + +P+   F++GVINLRG ++PI+D+R+RF L + 
Sbjct: 374 FKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFHLPEM 433

Query: 92  EYLPTTVVLILSAREQEQKRLMGLVVDSVSDV--IGQGDMPLHPAIGESMVVPFLSGILN 149
                  +L+++     +K   G +VDSVS+V  I +  +   P + E      +  ++N
Sbjct: 434 ARHERQRILVVNF----EKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQ-AQLMRQMVN 488

Query: 150 VGDEVMSLLDSDALL 164
           +   ++ +L +D L+
Sbjct: 489 LSPRMIGVLSADQLI 503



 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 9/130 (6%)

Query: 34  MLGTELYGVTLSHVEEI-RVWEKPTPIPRAPHFVKGVINLRGMIVPIIDLRQRFGLTQYE 92
           M+  + Y   L   +EI R+ E  T +P     + GVINLRG  +P++ LR  FGL    
Sbjct: 197 MVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLFGLPSIS 256

Query: 93  YLPTTVVLILSAREQEQKRL-MGLVVDSVSDVIGQGDMPLHPAIGESMVVPFLSGILNVG 151
           +  +  VL+++    E++RL +G+VVD+V +VI      LH  + +S  VP +   +   
Sbjct: 257 FSDSHRVLVVNISLSEKERLPVGVVVDAVREVI-----RLHVDVMDS--VPEIMSKMGQA 309

Query: 152 DEVMSLLDSD 161
           +++ ++ + D
Sbjct: 310 NDISAICNLD 319



 Score = 54.3 bits (129), Expect = 3e-12
 Identities = 40/159 (25%), Positives = 77/159 (48%), Gaps = 9/159 (5%)

Query: 9   SSSAALEPILSMDMGLTGGADFLSFMLGTELYGVTLSHVEEIRVWEKPTPIPRAPHFVKG 68
           +S A ++  L  +  LT    +++FMLG EL+ + +  VEEI        +P  P ++ G
Sbjct: 2   TSEALVDNELEHEENLT---QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIG 58

Query: 69  VINLRGMIVPIIDLRQRFGLTQYEYLPTTVVLILSAREQEQKRLMGLVVDSVSDVIGQGD 128
           + NLRG I+P++ LR    + +      T V++++      K  +G  VD V +V     
Sbjct: 59  LSNLRGQILPVLCLRTLLCMDRTSATEATRVIVITI----GKTKIGFTVDRVVNVATPDP 114

Query: 129 MPLHP--AIGESMVVPFLSGILNVGDEVMSLLDSDALLD 165
             + P    G  +    ++  ++  ++++ +L+   LLD
Sbjct: 115 EMIKPTNTAGGKIDPTLITNTIHSDNQIIQVLNCHRLLD 153