Pairwise Alignments

Query, 175 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 163 a.a., Chemotaxis protein CheW from Alteromonas macleodii MIT1002

 Score = 89.4 bits (220), Expect = 3e-23
 Identities = 47/137 (34%), Positives = 82/137 (59%), Gaps = 6/137 (4%)

Query: 30  FLSFMLGTELYGVTLSHVEEIRVWEKPTPIPRAPHFVKGVINLRGMIVPIIDLRQRFGLT 89
           ++++ LG E YG+ +  V+E+  + +  P+P AP +V G+INLRG +V +ID R RFGL 
Sbjct: 20  WVTYRLGEETYGINVMQVQEVLRYTEIAPVPGAPDYVLGIINLRGNVVTVIDTRARFGLP 79

Query: 90  QYEYLPTTVVLILSAREQEQKRLMGLVVDSVSDVI--GQGDMPLHPAIGESMVVPFLSGI 147
             E    T ++I+ + EQ    ++G++VDSV++V+     ++   P +G      F+ G+
Sbjct: 80  PTEITDNTRIVIIESDEQ----VVGILVDSVAEVVYLKSSEIDSAPNVGTEESAKFIQGV 135

Query: 148 LNVGDEVMSLLDSDALL 164
            N   E++ L+D + LL
Sbjct: 136 SNRDGELLILVDLNKLL 152



 Score = 24.6 bits (52), Expect = 9e-04
 Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 9/65 (13%)

Query: 38  ELYGVTLSHVEEIRVWEKPTPIPRAPH--------FVKGVINLRGMIVPIIDLRQRFGLT 89
           ++ G+ +  V E+ V+ K + I  AP+        F++GV N  G ++ ++DL +     
Sbjct: 97  QVVGILVDSVAEV-VYLKSSEIDSAPNVGTEESAKFIQGVSNRDGELLILVDLNKLLSDE 155

Query: 90  QYEYL 94
           +++ L
Sbjct: 156 EWDEL 160