Pairwise Alignments

Query, 153 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score = 61.2 bits (147), Expect = 2e-14
 Identities = 35/108 (32%), Positives = 64/108 (59%), Gaps = 2/108 (1%)

Query: 5   EFLSFVLDDEEYGIPILEVREV-RGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLG 63
           + + F LD EE+GI I  V+E+ R    +  +P    F+ G++++RG  +PIVD+++R  
Sbjct: 370 QLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLPIVDMRKRFH 429

Query: 64  LVPVEINATTVVVVINAANQQPLGLIVDAVAEVYALSEQEIKHAPSIS 111
           L  +  +    ++V+N   +   G IVD+V+EV  + E +++ AP +S
Sbjct: 430 LPEMARHERQRILVVN-FEKISTGFIVDSVSEVLRIPESQLEDAPVLS 476



 Score = 59.7 bits (143), Expect = 7e-14
 Identities = 39/149 (26%), Positives = 80/149 (53%), Gaps = 12/149 (8%)

Query: 4   REFLSFVLDDEEYGIPILEVRE-VRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRL 62
           R+ +  ++D +EY  P+ + +E VR    +  +P     ++G++++RG+ +P+V L+   
Sbjct: 191 RQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTLPLVSLRTLF 250

Query: 63  GLVPVEINATTVVVVINAA----NQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQY 118
           GL  +  + +  V+V+N +     + P+G++VDAV EV  L    +   P I + +G   
Sbjct: 251 GLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQ-- 308

Query: 119 VKGIAAVKS-----KHLVLIDIDALFDVE 142
              I+A+ +     + L +I ++ LFD +
Sbjct: 309 ANDISAICNLDDGRRTLSVISVEQLFDAQ 337



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 4/147 (2%)

Query: 5   EFLSFVLDDEEYGIPILEVREVRGWSPVRILPNAPPFVIGLLDIRGEYIPIVDLKRRLGL 64
           ++++F+L DE + + + EV E+        +P  P ++IGL ++RG+ +P++ L+  L +
Sbjct: 19  QYVNFMLGDELFALHMQEVEEIIRLPTTFSVPLTPSYLIGLSNLRGQILPVLCLRTLLCM 78

Query: 65  VPVEINATTVVVVINAANQQPLGLIVDAVAEVYALSEQEIKHAPSISTVIGNQYVKGIAA 124
                   T V+VI     + +G  VD V  V     + IK   +    I    +     
Sbjct: 79  DRTSATEATRVIVITIGKTK-IGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIH 137

Query: 125 VKSKHLVLIDIDALFD---VEALRLST 148
             ++ + +++   L D    E L LST
Sbjct: 138 SDNQIIQVLNCHRLLDNSVEEELELST 164