Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  309 bits (791), Expect = 3e-88
 Identities = 170/307 (55%), Positives = 223/307 (72%), Gaps = 1/307 (0%)

Query: 324 LLNTLVEPLGQCITVMSRVAEGDLNTSMSEEYQG-EFGRLASAVNASIVNLRNMVDKITV 382
           L  ++  PL    T+   +A+ DL       Y   E G L  A++     L+  + ++  
Sbjct: 210 LARSITRPLHNAETIAQAIADMDLTGKPQHSYANDETGHLLRALDLMRTALQGSLTQVHG 269

Query: 383 SSARVATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATD 442
               V+TAST+IA GN DLS R E QAS+LEETAAS+EE+T+TV+QNADNA+ AN LAT 
Sbjct: 270 VVMNVSTASTQIATGNQDLSSRTEEQASSLEETAASIEELTSTVKQNADNARQANQLATS 329

Query: 443 AAKKAARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQ 502
           A++ A RGG VV + +  MG+IN +SKKI DIISVID IAFQTN+LALNAAVEAARAG+Q
Sbjct: 330 ASEVAVRGGSVVFQVVETMGSINASSKKIVDIISVIDGIAFQTNILALNAAVEAARAGDQ 389

Query: 503 GRGFAVVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRV 562
           GRGFAVVA EVRNLAQRSA AAKEIK LI +SV+KV EGSR V ++G T+ EIV +V RV
Sbjct: 390 GRGFAVVASEVRNLAQRSAAAAKEIKTLIGNSVEKVEEGSRQVADAGRTMDEIVGSVKRV 449

Query: 563 SDLIAQIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLM 622
           +D++ +I+A+S EQ++GI++IN+AI  MD+ TQQNA+LVEE SAA+QSL+++   L  ++
Sbjct: 450 TDIMGEISAASQEQTSGIEQINQAITQMDQATQQNAALVEEASAAAQSLQEQAGSLAQIV 509

Query: 623 NFFVTEN 629
             F  E+
Sbjct: 510 GQFKLEH 516