Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  330 bits (847), Expect = 9e-95
 Identities = 189/363 (52%), Positives = 249/363 (68%), Gaps = 12/363 (3%)

Query: 328 LVEPLGQCITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARV 387
           +V PLGQ + V   VA GDL+T++  E + E G+L  A+     +L  +V ++   +  +
Sbjct: 214 IVRPLGQAVQVAETVAAGDLSTNIKVESRDEAGQLMQALKNMNESLAKVVGEVRTGTETI 273

Query: 388 ATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKA 447
           ATAS +IA GN DLS R E QAS+LE+TAASMEE+T+TV+QNADNA+ AN LA  A++ A
Sbjct: 274 ATASGQIASGNQDLSSRTEEQASSLEQTAASMEELTSTVKQNADNARQANQLAMSASEVA 333

Query: 448 ARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFA 507
            +GG VV + +  MG+IN +SKKI DII VID IAFQTN+LALNAAVEAARAGEQGRGFA
Sbjct: 334 VKGGSVVSQVVDTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFA 393

Query: 508 VVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIA 567
           VVA EVRNLAQRSA AAKEIK LI +SV+KV EGS+ V E+G T+ EIV +V RV+D++ 
Sbjct: 394 VVASEVRNLAQRSAAAAKEIKTLIGNSVEKVEEGSKQVEEAGRTMDEIVGSVKRVTDIMG 453

Query: 568 QIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFF-V 626
           +I A+S EQ++GI++IN+AI  MD+ TQQNA+LVEE SAA+QSL+++   L+  ++ F +
Sbjct: 454 EITAASQEQTSGIEQINQAITQMDQATQQNAALVEEASAAAQSLQEQAGSLVQAVSVFKL 513

Query: 627 TENNVTTFERKPRQSTP-PKT-KPVVSMHKAPINQ---------AVHKMPARAAEEGDEW 675
             N V T      + TP PKT +P  +  K P            A     A A +   +W
Sbjct: 514 DANAVATVRPGFTRITPIPKTARPAPAAAKRPAKALPARREPGGAAAPQLAMAGDAKGDW 573

Query: 676 EEF 678
            EF
Sbjct: 574 TEF 576