Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  310 bits (795), Expect = 9e-89
 Identities = 174/341 (51%), Positives = 238/341 (69%), Gaps = 8/341 (2%)

Query: 338 VMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIADG 397
           V+ R+A+GDL+ ++  +   E G L  ++    + L ++V KI  SS  +A AS +IA G
Sbjct: 235 VVGRIADGDLSMAVEADAAHE-GSLLHSIKLMQLQLTSIVGKIKDSSDVIADASGQIASG 293

Query: 398 NNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVVGEA 457
           N DLS R E QAS+LE+TAASMEE+T+TV+QNADNA+ AN LA  A++ A +GG VV + 
Sbjct: 294 NQDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEVAVKGGSVVSQV 353

Query: 458 ISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLA 517
           ++ MG+IN +SKKI DII VID IAFQTN+LALNAAVEAARAGEQGRGFAVVA EVR+LA
Sbjct: 354 VTTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA 413

Query: 518 QRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSVEQS 577
           QRSA AAKEIK LI DSV+KV EGS+ V E+G T+ EIV +V RV+D++ +I A+S EQ+
Sbjct: 414 QRSAAAAKEIKTLIGDSVEKVAEGSKQVEEAGRTMDEIVGSVRRVTDIMGEITAASQEQT 473

Query: 578 TGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFVTENNVTTFERK 637
           +GI++IN+AI  MD++TQQNA+LVEE SAA+QSL+++   L+  ++ F  + +     R 
Sbjct: 474 SGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGSLVQAVSTFKLDASHQAAPRA 533

Query: 638 PRQSTPPKTKPVVSMHKAPINQAVHKMPARAAEEGDEWEEF 678
             ++ P       ++       ++   P  A     +W EF
Sbjct: 534 RAEALP-------AVQDDNNKSSLPAAPQLAVAGAGDWREF 567