Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  317 bits (811), Expect = 1e-90
 Identities = 169/304 (55%), Positives = 226/304 (74%)

Query: 327 TLVEPLGQCITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSAR 386
           ++V PL + + V   VA GDL+  +  E + E G+L  A+     +L  +V ++   +  
Sbjct: 214 SIVRPLTRAVEVAETVAAGDLSVDIRAESRDETGQLMQALKNMNDSLAKVVGEVRTGTET 273

Query: 387 VATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKK 446
           +ATAS +IA GN+DLS R E QAS+LE+TAASMEE+T+TV+QNADNA+ AN LA  A++ 
Sbjct: 274 IATASGQIASGNHDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASEV 333

Query: 447 AARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGF 506
           A +GG VV + +  MG+IN +SKKI DII VID IAFQTN+LALNAAVEAARAGEQGRGF
Sbjct: 334 AVKGGSVVSQVVDTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF 393

Query: 507 AVVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLI 566
           AVVA EVR+LAQRSA AAKEIK LI DSV+KV  GS+ V E+G T+ EIV +V RV+D++
Sbjct: 394 AVVASEVRSLAQRSAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMDEIVGSVRRVTDIM 453

Query: 567 AQIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFV 626
            +I A+S EQ++GI++IN+AI  MD++TQQNA+LVEE SAA+QSL+++   L  ++  F 
Sbjct: 454 GEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGSLSQIVGVFR 513

Query: 627 TENN 630
            E +
Sbjct: 514 LEGS 517



 Score = 46.6 bits (109), Expect = 3e-09
 Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 31/181 (17%)

Query: 347 LNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIADGNNDLSQRVE 406
           LN ++     GE GR  + V + + +L          + R A A+ EI     D  ++VE
Sbjct: 377 LNAAVEAARAGEQGRGFAVVASEVRSL----------AQRSAAAAKEIKTLIGDSVEKVE 426

Query: 407 AQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVVGEAISAMGAINT 466
           A +  + E   +M+EI  +VR+  D                     ++GE  +A     +
Sbjct: 427 AGSKQVAEAGRTMDEIVGSVRRVTD---------------------IMGEITAASQEQTS 465

Query: 467 ASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAGAAKE 526
             ++I   I+ +D++  Q   L   A+  A    EQ    + + G  R    R+AG A++
Sbjct: 466 GIEQINQAITQMDQVTQQNAALVEEASAAAQSLQEQAGSLSQIVGVFRLEGSRAAGTARQ 525

Query: 527 I 527
           +
Sbjct: 526 L 526