Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  300 bits (768), Expect = 1e-85
 Identities = 167/303 (55%), Positives = 222/303 (73%), Gaps = 3/303 (0%)

Query: 327 TLVEPLGQCITVMSRVAEGDLNTSMSEEYQG-EFGRLASAVNASIVNLRNMVDKITVSSA 385
           T+  PL + + V   +A GDL  +  E  +G E   L  A+N    NL  +V  +  + A
Sbjct: 229 TVFRPLDEALHVARAIAGGDL--AKFEIRRGDEITGLLRALNQMSANLFAIVADVGTNVA 286

Query: 386 RVATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAK 445
            V +AS++IA GN DLS R E QAS+LE+TAASMEE+T+TV+QNADNA+ AN LA  A++
Sbjct: 287 GVMSASSQIASGNQDLSSRTEQQASSLEQTAASMEELTSTVKQNADNARQANQLAVSASE 346

Query: 446 KAARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRG 505
            A +GG VV + +  MG+IN +S+KI DII VID IAFQTN+LALNAAVEAARAGEQG+G
Sbjct: 347 VAVKGGSVVSQVVDTMGSINASSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGKG 406

Query: 506 FAVVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDL 565
           FAVVA EVR+LAQRSA AAKEIK LI DSV+KV  GS+ V E+G T++EIV +V RV+D+
Sbjct: 407 FAVVASEVRSLAQRSAAAAKEIKTLIGDSVEKVEAGSKQVAEAGRTMEEIVGSVRRVTDI 466

Query: 566 IAQIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFF 625
           + +I  +S EQ++GI++IN+AIA MD++TQQNA+LVEE SA +QSL+++   L+  +  F
Sbjct: 467 MGEITTASQEQTSGIEQINQAIAQMDQVTQQNAALVEEASATAQSLQEQADGLVRAVRVF 526

Query: 626 VTE 628
             E
Sbjct: 527 RAE 529