Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Variovorax sp. SCN45

 Score =  322 bits (824), Expect = 4e-92
 Identities = 181/358 (50%), Positives = 247/358 (68%), Gaps = 5/358 (1%)

Query: 324 LLNTLVEPLGQCITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVS 383
           +  ++  PL + + V  RVA+GDL   +  +   E GR+ +A+     +L   V ++  +
Sbjct: 208 ITRSITHPLNRAVAVADRVAQGDLGEPIEVQSTDETGRMLTALQRMQESLARTVGQVRGN 267

Query: 384 SARVATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDA 443
           +  VA+AS +I+ GN DLS R E QAS+LE+TAASMEE+T+TV+QNADNA+ AN LA  A
Sbjct: 268 AEGVASASAQISQGNEDLSSRTEEQASSLEQTAASMEELTSTVKQNADNARQANQLAVSA 327

Query: 444 AKKAARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQG 503
           ++ A +GG VVG+ +  M +I+ +S+KI +II VID IAFQTN+LALNAAVEAARAGEQG
Sbjct: 328 SEVAVKGGAVVGKVVETMASIDASSRKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQG 387

Query: 504 RGFAVVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVS 563
           RGFAVVAGEVRNLAQRSA AAKEIK LI DSV KV+ G+ LV+E+G T+ +IV +V RV+
Sbjct: 388 RGFAVVAGEVRNLAQRSAAAAKEIKDLIGDSVGKVDAGTALVSEAGRTMDDIVGSVRRVT 447

Query: 564 DLIAQIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMN 623
           D++ +I A+S EQ++GI++IN+AI  MD++TQQNA+LVEE +AA+ SL+D+   LL  ++
Sbjct: 448 DIMGEITAASQEQTSGIEQINQAITQMDQVTQQNAALVEEAAAAAASLRDQAGNLLQAVS 507

Query: 624 FFVTENNVTTFERKPRQSTPPKTKPVVSMHKAPINQ---AVHKMPARAAEEGDEWEEF 678
            F  E+   +        T PK K V +    P+     AV   P  A  EG EWE F
Sbjct: 508 VFKLEDGHQSAVLVAPVVT-PKAKAVKAPAALPVRSRVAAVAASPKLAIAEG-EWERF 563