Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  323 bits (827), Expect = 2e-92
 Identities = 175/351 (49%), Positives = 241/351 (68%), Gaps = 10/351 (2%)

Query: 338 VMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIADG 397
           VM+ ++ GDL+  ++  ++GEF  L   ++  IV LR ++  I   +A +  A+TEI++G
Sbjct: 309 VMTALSSGDLSAQLTHPFEGEFAELGEVISQFIVTLRQIITDINSVAATIKLAATEISNG 368

Query: 398 NNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVVGEA 457
           N DLS R E QASNLE+TA+SMEE+ +TVRQN+DNA  AN+LA  A + AA GGE++ + 
Sbjct: 369 NTDLSSRTEQQASNLEQTASSMEELNSTVRQNSDNAMQANILAGKATEIAASGGELIEQV 428

Query: 458 ISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLA 517
           +  M +IN +++KIADII VID IAFQTN+LALNAAVEAARAGEQGRGF+VVA EVR+LA
Sbjct: 429 VVTMASINESAQKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRSLA 488

Query: 518 QRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSVEQS 577
           QRSA AAK+IK LI+DSV K++ G+ LV+ SGST+K+IV ++ RV DL+A IA++S EQ+
Sbjct: 489 QRSANAAKDIKALISDSVSKISNGNELVDRSGSTMKDIVVSIKRVHDLMADIASASAEQA 548

Query: 578 TGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFVTENNVTTFE-- 635
           TGI+E+N+A+  MDEMTQQNA+LVEE +AAS+SL  + ++L + +  F   +  T+    
Sbjct: 549 TGINEVNQAVNQMDEMTQQNAALVEEAAAASESLLAQAEQLYDHVAMFRLPDQDTSAPSL 608

Query: 636 ----RKPRQSTPPKTKPVVSMHKAP----INQAVHKMPARAAEEGDEWEEF 678
                K  QS P    P   + K P       +    P       +EWE F
Sbjct: 609 LKAVNKRPQSAPVTRHPASHIAKTPAKITAKASSRAQPVMQVAHDEEWESF 659