Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  302 bits (774), Expect = 2e-86
 Identities = 172/352 (48%), Positives = 234/352 (66%), Gaps = 15/352 (4%)

Query: 327 TLVEPLGQCITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSAR 386
           +L+ P+ + I  +  +A GDL   +  E   E G+LA  +      L   V  +   +  
Sbjct: 217 SLIAPMNRLIESIRHIASGDLVKRIDVEGSNEMGQLAENLRHMQSELMRTVGDVRNGANA 276

Query: 387 VATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKK 446
           + + ++EIA GNNDLS R E QA++LEETAASME++TATV+QNA+NA+ A+ LA  A++ 
Sbjct: 277 IYSGASEIAMGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASET 336

Query: 447 AARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGF 506
           A +GG+VV   +  M  I ++S+KIADIISVID IAFQTN+LALNAAVEAARAGEQGRGF
Sbjct: 337 AQKGGKVVDNVVQTMRDIASSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGF 396

Query: 507 AVVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLI 566
           AVVAGEVRNLAQRSA AA+EIK LI DSV +V+ GS LV  +G T+ EIV AV RV+D++
Sbjct: 397 AVVAGEVRNLAQRSAQAAREIKSLIEDSVSRVDVGSTLVESAGETMDEIVNAVTRVTDIM 456

Query: 567 AQIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFV 626
            +IA++S EQS GID++  A+A MD +TQQNASLVEE++AA+ +L+++   L   +  F 
Sbjct: 457 GEIASASDEQSRGIDQVGLAVAEMDRVTQQNASLVEESAAAAAALEEQASRLTQAVAVF- 515

Query: 627 TENNVTTFERKPRQSTPPKTKPVVSMHKAPINQAVHKMPARAAEEGDEWEEF 678
               +   +++ R+    KT   VS  KA +           A+  D WE F
Sbjct: 516 ---RIHQQQQRAREVAAVKTPAAVSSPKAAV-----------ADGSDNWETF 553