Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., methyl-accepting chemotaxis protein II from Escherichia coli ECRC62

 Score =  292 bits (748), Expect = 2e-83
 Identities = 170/351 (48%), Positives = 227/351 (64%), Gaps = 13/351 (3%)

Query: 328 LVEPLGQCITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARV 387
           L+ PL + I  +  +A G+L  +++ + + E G LA +V+    +L + V  +   S  +
Sbjct: 216 LLTPLAKIIAHIREIAGGNLANTLTIDGRSEMGDLAQSVSHMQRSLTDTVTHVREGSDAI 275

Query: 388 ATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKA 447
              + EIA GN DLS R E QAS LEETAASME++TATV+QNADNA+ A+ LA  A+  A
Sbjct: 276 YAGTREIAAGNTDLSSRTEQQASALEETAASMEQLTATVKQNADNARQASQLAQSASDTA 335

Query: 448 ARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFA 507
             GG+VV   +  M  I  +SKKIADIISVID IAFQTN+LALNAAVEAARAGEQGRGFA
Sbjct: 336 QHGGKVVDGVVKTMHEIADSSKKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFA 395

Query: 508 VVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIA 567
           VVAGEVRNLA RSA AAKEIK LI DSV +V+ GS LV  +G T+  IV AV RV+D++ 
Sbjct: 396 VVAGEVRNLASRSAQAAKEIKALIEDSVSRVDTGSVLVESAGETMNNIVNAVTRVTDIMG 455

Query: 568 QIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFVT 627
           +IA++S EQS GID++  A++ MD +TQQNASLV+E++AA+ +L+++   L   ++ F  
Sbjct: 456 EIASASDEQSRGIDQVALAVSEMDRVTQQNASLVQESAAAAAALEEQASRLTQAVSAF-- 513

Query: 628 ENNVTTFERKPRQSTPPKTKPVVSMHKAPINQAVHKMPARAAEEGDEWEEF 678
                      R +  P T    +  +    Q   +   R AE+   WE F
Sbjct: 514 -----------RLAASPLTNKPQTPSRPASEQPPAQPRLRIAEQDPNWETF 553