Pairwise Alignments

Query, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 658 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  298 bits (763), Expect = 5e-85
 Identities = 168/351 (47%), Positives = 238/351 (67%), Gaps = 1/351 (0%)

Query: 328 LVEPLGQCITVMSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARV 387
           +  PL Q + +  ++A+GDL  S++   + E G L SA+ A    LR M+ +I    + V
Sbjct: 309 ITRPLHQSLALAEQIAQGDLTASINVVRRDELGMLMSAMAAMNHKLREMIGEIREGVSNV 368

Query: 388 ATASTEIADGNNDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKA 447
           A+A++EIA GN DLS R E Q++ + ETAASME++T+TV+QNADNA  A+ LA DA+  A
Sbjct: 369 ASAASEIAAGNTDLSSRTEQQSAAVVETAASMEQLTSTVKQNADNAHHASQLAADASGNA 428

Query: 448 ARGGEVVGEAISAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFA 507
            +GGE+V   +S M  I  +S++I++I SVI+ IAFQTN+LALNAAVEAARAGEQGRGFA
Sbjct: 429 TKGGEIVTNVVSTMNEIAVSSRRISEITSVINGIAFQTNILALNAAVEAARAGEQGRGFA 488

Query: 508 VVAGEVRNLAQRSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIA 567
           VVAGEVRNLAQRSA AAKEI+ LI +SV +VN GS LV  +G T+ EI+ ++  V D++ 
Sbjct: 489 VVAGEVRNLAQRSAQAAKEIETLIGESVTRVNTGSTLVESAGKTMDEIIRSISHVHDIMD 548

Query: 568 QIAASSVEQSTGIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFVT 627
           +IA++S EQS GI++I+ A+A MD  TQQNA+LVEE+SAA+ SL+++ + L + ++ F  
Sbjct: 549 EIASASDEQSRGINQISTAVAEMDATTQQNAALVEESSAAANSLEEQAQTLEHAVSVFRL 608

Query: 628 ENNVTTFERKPRQSTPPKTKPVVSMHKAPINQAVHKMPARAAEEGDEWEEF 678
            N+     R  ++++    KP+     A          A A +  D+WE F
Sbjct: 609 GND-DVATRPVQRASLSAGKPLKLTASAAKTATAAVNRASATKVKDDWESF 658