Pairwise Alignments

Query, 233 a.a., chemoreceptor glutamine deamidase CheD from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., Chemotaxis protein CheD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  140 bits (354), Expect = 2e-38
 Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 15/196 (7%)

Query: 20  SKLATKRKLKQEEAKGQYYRFNHPSDHRHWVKVMPGGVYATSDQEIIHTGLGSCVSACAW 79
           S+L   R    +  +  ++  +H   H   VKV+PG  Y T+D  ++ T LGSC++AC W
Sbjct: 16  SRLNALRARSPKPGEASFFYQDHHFKHDA-VKVLPGEYYVTADDLVVMTVLGSCIAACIW 74

Query: 80  DIEMKVGGMNHFLLPFNNQFESQHWHPQALLSDSSRYGCYAMEVLINRLLSMGAERERLK 139
           D  ++VGGMNHF+LP                  S RYG YAME+LIN ++ +GA RE ++
Sbjct: 75  DPRVRVGGMNHFMLPDGGN------------DSSGRYGSYAMELLINEMIKLGARRESMQ 122

Query: 140 FKLFGGAHLMGYQSL--VGEKNVEFVLEYAKREKLNVVAQDLGGAQPRKLLFDPQTGQAW 197
            K+FGG  +M   +   VGE+N  FVL+Y + E++ VV++D+    PRK+ + P TG+A 
Sbjct: 123 AKVFGGGQVMHTFTTMNVGERNTAFVLDYLQTERIAVVSKDVLDIYPRKVCYFPATGKAM 182

Query: 198 VKRIGFSSAHAIKQDE 213
           VKR+  S    I+  E
Sbjct: 183 VKRLAHSHPETIETQE 198