Pairwise Alignments

Query, 233 a.a., chemoreceptor glutamine deamidase CheD from Vibrio cholerae E7946 ATCC 55056

Subject, 181 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  105 bits (261), Expect = 8e-28
 Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 10/148 (6%)

Query: 50  VKVMPGGVYATSDQEIIHTG-LGSCVSACAWDIEMKVGGMNHFLLPFNNQFESQHWHPQA 108
           V ++ G     SD +++ T  LGSCV+AC  D    +GGMNHFLLP              
Sbjct: 9   VHIIQGEYKVVSDPDVVMTTILGSCVAACLRDPVAGLGGMNHFLLPGTGNVTG------- 61

Query: 109 LLSDSSRYGCYAMEVLINRLLSMGAERERLKFKLFGGAHLMGYQSLVGEKNVEFVLEYAK 168
              D++RYG + ME+LIN LL  GA R+RL+ K+FGGA  +   S VGE+N  F +++ K
Sbjct: 62  --GDATRYGVHLMELLINGLLKQGARRDRLEAKVFGGAKTIASFSNVGEQNAIFAMQFLK 119

Query: 169 REKLNVVAQDLGGAQPRKLLFDPQTGQA 196
            E + V++   GG   RK+ F P +G+A
Sbjct: 120 DEGIPVISSSTGGDHGRKIEFWPVSGRA 147