Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., pili assembly chaperone from Pseudomonas simiae WCS417

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 15/142 (10%)

Query: 119 SSVSTQLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHSIHDMSQKL 178
           S+ +T + ++  A +GSE            ++QQ VQI+ ++S     A  SI  +S++ 
Sbjct: 270 SAHATSVQNDACARKGSE------------VVQQTVQIIEEISHDLNQAAVSIDAVSKQS 317

Query: 179 DMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANLNTQIE 238
           D++  ++  +RS++EQTN+LALNAAIEAARAGE GRGFAVVA EVR+L+ + +    +I 
Sbjct: 318 DIIGAIVQTIRSIAEQTNMLALNAAIEAARAGEHGRGFAVVADEVRSLAARTSQATVEI- 376

Query: 239 TEMKVAQDTVDIANRTVGEMAS 260
             + V +   D++   V  M S
Sbjct: 377 --VDVVRKNHDLSLSAVSSMQS 396