Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 21/219 (9%)

Query: 71  ALSLLEQVLKENIQRVAEPLEKQRLI--INSSAETLNNSFFGLQRVSEEQSSVSTQLVDN 128
           A  LL  + K NI    +  E +++   IN  A ++     G +  +    S + + +  
Sbjct: 262 ANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVATGAKHAANSSESANHETISG 321

Query: 129 LMANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQV 188
                             + I+ Q  Q + ++  +   A   IH++ +  + + K+L  +
Sbjct: 322 ------------------QQIVSQASQSITELEHEVSQAKQVIHELEEHSNDISKVLEVI 363

Query: 189 RSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANLNTQIETEMKVAQDTV 248
           RS+++QTNLLALNAAIEAARAGE+GRGFAVVA EVR L+ +       I+  +   Q   
Sbjct: 364 RSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTLQGRA 423

Query: 249 DIANRTVGEMASFDMTQAIESKEKVDYMLRGVQQLNTEI 287
            +A   V E +S     ++E  ++    L G+ +  ++I
Sbjct: 424 KLA-VAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDI 461



 Score = 39.3 bits (90), Expect = 3e-07
 Identities = 45/217 (20%), Positives = 90/217 (41%), Gaps = 28/217 (12%)

Query: 166 SAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRN 225
           + +  I D S +L+   K  N +    E++N+L      E  +   A    A   QEV  
Sbjct: 246 AVIGRIGDASNQLN---KFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVAT 302

Query: 226 LSIQAANLNTQIETEMKVAQDTVDIANRTVGEMASFDMTQAIESKEKVDYMLRGVQQLNT 285
            +  AAN +     E    Q  V  A++++ E+   +++QA              +Q+  
Sbjct: 303 GAKHAANSSESANHETISGQQIVSQASQSITEL-EHEVSQA--------------KQVIH 347

Query: 286 EIEQEVNKLQRLGQQLTQQVREGTRALQFTDIV--YQQGEYALGSITFLQEASGLLKAVQ 343
           E+E+  N + ++  ++ + + + T  L     +   + GE   G      E  GL    Q
Sbjct: 348 ELEEHSNDISKV-LEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQ 406

Query: 344 SNSRNVQQLIENIE-------ALQERSRNRGGLAANQ 373
            ++ ++Q++I+ ++       A+ E S  +  L+  Q
Sbjct: 407 QSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQ 443