Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 37/243 (15%)

Query: 91  EKQRLIINSSAETLNNSFFGLQRVSEEQSSVSTQLVD-NLMANQGSEFDLMQVLPKTEAI 149
           E+Q +  NS A  +N      Q ++   +  S      +  A+ G E            +
Sbjct: 394 EEQSMRTNSVAAAINELGAATQEIARNAADASQHASGASEQAHGGRE------------V 441

Query: 150 IQQFVQILVDVSEKSISAVHSIHDMSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARA 209
           +++ +  +  +S++   +   I  ++   D + K+L+ ++ +S+QTNLLALNAAIEAARA
Sbjct: 442 VEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARA 501

Query: 210 GEAGRGFAVVAQEVRNL----------------SIQAANLNT--QIETEMKVAQDTVDIA 251
           GEAGRGFAVVA EVRNL                S+Q  +      + T    ++ TV +A
Sbjct: 502 GEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVA 561

Query: 252 NRTVGEMASFDMTQAIESKEKVDYMLRGVQQLNTEIEQEVN----KLQRLGQQLTQQVRE 307
           N+    +AS  +TQ I   + ++  +    +  T + + +N    ++  L QQ  + + E
Sbjct: 562 NQAGERLAS--VTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQQGVENLNE 619

Query: 308 GTR 310
             R
Sbjct: 620 TLR 622