Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 83/333 (24%), Positives = 149/333 (44%), Gaps = 37/333 (11%)

Query: 30  WLGLI-----AICIGLLP-WLAGGA---PQPSIVT-----AQPTDDVRLSAEQQQALSLL 75
           WLGL+     A+ +GLL  WL   +   P   ++      +Q +   R+ + ++  L  L
Sbjct: 203 WLGLLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRL 262

Query: 76  EQV--------------LKENIQRVAEPLEKQRLIINSSAETLNNSFFGLQRVS---EEQ 118
            +               L++N Q +     + R I    A   ++ F    +V+    E 
Sbjct: 263 ARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEM 322

Query: 119 SSVSTQLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHSIHDMSQKL 178
           S+ + ++  +      +  D        E ++QQ + I+  V+ +       I D+    
Sbjct: 323 SATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDS 382

Query: 179 DMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANLNTQIE 238
             + K+L  +R ++EQTNLLALNAAIEAARAGEAGRGFAVVA EVR+L+ + A    +I 
Sbjct: 383 TRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIH 442

Query: 239 TEMKVAQDTVDIANRTV--GEMASFDMTQAIESK----EKVDYMLRGVQQLNTEIEQEVN 292
             ++  Q     A + +  G+  S +  + +E      +++   +  ++ +N +I     
Sbjct: 443 QIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAE 502

Query: 293 KLQRLGQQLTQQVREGTRALQFTDIVYQQGEYA 325
           +   + + +++ + E TR         Q  E A
Sbjct: 503 EQTSVAEDISRNLIEITRIATANQEAVQHTEQA 535