Pairwise Alignments

Query, 384 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 734 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score = 93.6 bits (231), Expect = 2e-23
 Identities = 83/310 (26%), Positives = 144/310 (46%), Gaps = 33/310 (10%)

Query: 60  DDVRLSAEQQQALSL------LEQVLKENIQRVAEPLEKQRLIINSSAETLNNSFFGLQR 113
           ++ R  AE+ +  +L      +E+  +  + R+AE    +R+  N+    L+ S  G   
Sbjct: 337 EEERRKAERDKIAALQGMAETVERETRAAVDRIAEMT--RRMADNAGGMALSASAVGDN- 393

Query: 114 VSEEQSSVSTQLVDNLMANQGSEFDLMQVLPKTEAIIQQFVQILVDVSEKSISAVHSIHD 173
            S+  ++ +TQ + N      +  +L   + +    +     +     E S  A  +I  
Sbjct: 394 -SQSVAAAATQALANAQTVAAAAEELSASIHEIANQVGTASTVTSTAVEASNQASRTISQ 452

Query: 174 MSQKLDMVFKLLNQVRSLSEQTNLLALNAAIEAARAGEAGRGFAVVAQEVRNLSIQAANL 233
           +S+ ++ + ++ N +  ++ QTNLLALNA IEAARAGEAG+GFAVVA EV+NL+ Q A  
Sbjct: 453 LSETVNRIGEVANLINDIASQTNLLALNATIEAARAGEAGKGFAVVANEVKNLANQTAKA 512

Query: 234 NTQIETEMKVAQDTVDIANRTVGEMASFDMTQAIESKEKVDYMLRGVQQLNTEIEQEVNK 293
             +I  ++   Q T   A R+VGE     +TQAI   + V   +    +      QE+ +
Sbjct: 513 TEEITAQIVAIQTTTQDAVRSVGE-----ITQAIGDVQGVSAAVATAIEEQGAATQEIAR 567

Query: 294 ------------LQRLGQQLTQQVREGTRALQFTDIVYQQGEYALGSITFLQEASGLLKA 341
                         R+ +  T+    G RA Q   +         G I  L+E   L++ 
Sbjct: 568 NVAQTSDAANEVADRIAKVSTEAAHTGERAAQVGSV----SSEVAGGIDHLREI--LIRV 621

Query: 342 VQSNSRNVQQ 351
           V++ ++ V +
Sbjct: 622 VRTATKEVNR 631