Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  281 bits (720), Expect = 4e-80
 Identities = 174/555 (31%), Positives = 290/555 (52%), Gaps = 13/555 (2%)

Query: 1   MRVMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKD 60
           + V++ +D   +R L   I+      + T E+G+QA+    E    P ++LLD +MP+ D
Sbjct: 7   LTVLVAEDSAVDRLLLAQIVRRQGHQVFTAENGEQAVALYLERR--PQLVLLDALMPVMD 64

Query: 61  GFVTAKEIRQAFVKHHIPIIFLTVLDDRDSFEKCL-ALGDDFILKPVERSVLIAKVQAHY 119
           GF  A++I+    +  +PIIFLT L++ +   +CL A GDDF+ KP    +L AK++A  
Sbjct: 65  GFEAARQIKALAGEALVPIIFLTSLNEEEGLVRCLEAGGDDFMAKPYSAVILAAKIRAMD 124

Query: 120 RIVKMHNEVMEQRDELRHFREQVQYDYAISESIFTNLMEEMCHQVEHIFGIHYISTPSTI 179
           R+ ++   V+EQRD++      +  +  +++++F  +    C    +I    Y+ +P  +
Sbjct: 125 RLRRLQATVLEQRDQITRHHHHLLNEQRVAKAVFDKVAHSGCLSAPNI---RYLQSPYAL 181

Query: 180 FNGDLIVVANRPHGGVYVMIADATGHGLPAAISTIPATRTFFSTAQKGLSLGEMVIELNH 239
           FNGDL++ A  P G + V++ D TGHGLPAA+  +P    F+    KG  + +++ E+N 
Sbjct: 182 FNGDLMLAAFTPAGDMRVLLGDFTGHGLPAAVGAMPMAEVFYGMTAKGYGMAQILREMNA 241

Query: 240 SLERFLPVGMMLAASVFEVRANGFEISWWGGGLPEAYLLDHHGNIVSRLISNHMPLGVLP 299
            L+R LPV M   A +  +      +  W GG+P+ Y L   G ++S L S H+PLG+L 
Sbjct: 242 KLKRILPVDMFCCALLLNLSMQRGSVEVWNGGMPDGYRLSVDGQVLSALSSRHLPLGILA 301

Query: 300 SNEFEADVQHFKLEPNQKLVCYTDGIIEAMNEQGEYFGQERLEHVLTKAYSEA-LIPTLY 358
           +  F+   +   L P ++L+  +DG+I+  ++Q   FG +RL  VL        L   L 
Sbjct: 302 AERFDDSTEVLPLAPGERLLLLSDGVIDTADDQECLFGVQRLRAVLADNRDPVKLFDELM 361

Query: 359 DAVKKFSNRGKGDDLSILTMTFPITNSNSSDKALPKVVLSCIPLQTELHFP--ADVLRKI 416
            A+++F  + + DD+S+  +         +   +        PL   L F    + L++ 
Sbjct: 362 LALERFGGQPR-DDISLCDIRMFTAEERVAAPMIYSDSGRSSPLDWSLSFEVRGESLKRF 420

Query: 417 SLMNEVRRFLTGIVSGGEDLDLLCSVLSELFANAIEHGLLELDSSLKETPDGFFEFYQLR 476
           + +  + + L  I         L SVLSEL++NA+EHG+L LDS LK    GF ++YQ R
Sbjct: 421 NPVPYLVQLLQEIHGLRARTGNLHSVLSELYSNALEHGVLGLDSQLKRDVQGFTDYYQER 480

Query: 477 DKRLKTLPE-YHWLILKVNYQPDKQRIEIDLEHSGKGFDCQAL--KDASNQKSYGRGILL 533
            +RL +L E +  +  KV       R+ I++  SG GFD Q +  + + +Q   GRG+ L
Sbjct: 481 ARRLGSLTEGFVSIDFKVEPHGGGGRLMIEVRDSGAGFDVQRVLARPSPDQGLSGRGLNL 540

Query: 534 ATQLCESLEYSNQGR 548
             QL     +S  GR
Sbjct: 541 VRQLASDARWSEGGR 555