Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 899 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 78.2 bits (191), Expect = 1e-18
 Identities = 106/466 (22%), Positives = 187/466 (40%), Gaps = 48/466 (10%)

Query: 120 RIVKMHNEVMEQRDELRHFREQVQYDYAISESIFTNLMEEMCHQVEHIFGIHYISTPSTI 179
           R V++  E +  RD+L   R+++ +   +  S    +      + E  F IH    P+  
Sbjct: 439 RDVEILREALRTRDQLAALRQELDFARELQLSSLPQVFPPFPDRAE--FQIHASMVPAKE 496

Query: 180 FNGDLIVVANRPHGGVYVMIADATGHGLPAAISTIPATRTFFSTAQKGLSLGEMVIELNH 239
             GD        H  +  +I DA+G G+PAA+          + A    S GE +  +N 
Sbjct: 497 VGGDFYDFFFIDHHNLGFVIGDASGKGVPAAMFIAITRSLVKAVAPLSSSPGECLAFVNT 556

Query: 240 SLERFLPVGMMLAASVFEVRANGFEISWWGGGLPEAYLLDHHGNIVSRLISNHMPLGVLP 299
            L R  P  +        +     E+ +   G P   +L   G + +    + + LGV+ 
Sbjct: 557 MLARDNPQTLFATCFYGVLDTRTGEVGFCNAGHPPPMILRGDGRVDAIRDVSGVALGVME 616

Query: 300 SNEFEADVQHFKLEPNQKLVCYTDGIIEAMNEQGEYFGQERLEHVLTKAYS---EALIPT 356
             ++E    HF+L P + +  YTDG+ EA +     + + RL   L +      EA+I  
Sbjct: 617 DLDYETG--HFQLAPGEVVHLYTDGVTEAQDSVDALYDEPRLIAELGRTADTAPEAVIAA 674

Query: 357 LYDAVKKF-SNRGKGDDLSILTMTFPITNSNSSDKAL---PKVVLSCIPLQ--TELHFPA 410
           +  +V+ F  +  + DD+++LT+ F +  SN +D  +   P+++L+  P     E+   A
Sbjct: 675 VLRSVEAFVGSAPQFDDITMLTLRFDLA-SNEADAPMEDRPRLMLTGFPATGGNEMDGRA 733

Query: 411 DVLRKISLMNEVRR--FLTGIVSGGEDLDLLCSVLSELFANAIEHGLLELDSSLKETPDG 468
               +  +     R    T  VS   + D +  V+      A + G LE    L E  D 
Sbjct: 734 QGAPEDEIAAPPVRQPAATPSVSVPMEPDRVAMVI------ANDVGELE---RLAELVDV 784

Query: 469 FFEFYQLRDKRL----KTLPEYHWLILKVNY-QPDKQRIEIDLEHSGKGFDCQALKDASN 523
           F E + L +K        L E    I+   Y   D   I+++  + G+ F    + DA  
Sbjct: 785 FVEKHNLPEKLAFNLNVCLDELITNIISYGYDDEDSHEIQVEFVYDGREFVTTIIDDAKE 844

Query: 524 QKSY------------------GRGILLATQLCESLEYSNQGRRVT 551
              +                  G G+ L  +  +  +Y+++G R T
Sbjct: 845 YNPFVEAPIPDLDLDVDDRPIGGLGVFLVKEFMDGTDYAHEGGRNT 890