Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1329 a.a., PAS domain S-box from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 41/122 (33%), Positives = 72/122 (59%), Gaps = 6/122 (4%)

Query: 2    RVMIVDDHGTNRELCRFILAHIASHIDTFE--DGQQAIDAMREMEILPDVILLDVMMPIK 59
            +V+IV+D+  N  L + ++ +++      E  +G++A++ M++   LP VI +DV MP  
Sbjct: 1078 KVLIVEDNTINMLLAKTVIHNLSPATAILEAANGKEALEVMKDE--LPSVIFMDVQMPEM 1135

Query: 60   DGFVTAKEIRQAFVKHHIPIIFLTVLDDRDSFEKCLALG-DDFILKP-VERSVLIAKVQA 117
            +G+   + IR+ + KH+I II LT  + +   EKC+  G +DFI KP VE  V+    + 
Sbjct: 1136 NGYEATQAIRKKYNKHNILIIALTAGNIKGEREKCMQAGMNDFIAKPFVEEDVIKLMEKW 1195

Query: 118  HY 119
            H+
Sbjct: 1196 HF 1197



 Score = 45.1 bits (105), Expect = 2e-08
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 5/107 (4%)

Query: 3    VMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKDGF 62
            V+IVDD+  NR +   ++A         ++G +AI    E E   DV+L+D  MP  +G 
Sbjct: 938  VLIVDDNDNNRMIIERMMALRGISTSQAKNGFEAIQKFVEGEKF-DVVLMDYHMPYMNGI 996

Query: 63   VTAKEIRQAFVKHHIPIIFLTVLDDRDSFEK-CLALG-DDFILKPVE 107
             T ++IR+  +    PIIFL    D D   K C  LG    ++KP++
Sbjct: 997  ETIRKIRE--IVDRQPIIFLHSSSDDDKILKACKELGVRKKLVKPIK 1041